Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lhx1P63006 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lhx1P63006 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lhx1P63006 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lhx1P63006 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.13■□□□□ 0.81
Lhx1P63006 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lhx1P63006 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lhx1P63006 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Lhx1P63006 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lhx1P63006 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lhx1P63006 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Lhx1P63006 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Lhx1P63006 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.12■□□□□ 0.81
Lhx1P63006 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.12■□□□□ 0.81
Lhx1P63006 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lhx1P63006 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.12■□□□□ 0.81
Lhx1P63006 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lhx1P63006 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Lhx1P63006 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Lhx1P63006 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lhx1P63006 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lhx1P63006 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lhx1P63006 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.11■□□□□ 0.81
Lhx1P63006 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.11■□□□□ 0.81
Lhx1P63006 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lhx1P63006 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Lhx1P63006 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lhx1P63006 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Lhx1P63006 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lhx1P63006 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Lhx1P63006 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Lhx1P63006 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lhx1P63006 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lhx1P63006 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Lhx1P63006 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lhx1P63006 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.1■□□□□ 0.81
Lhx1P63006 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lhx1P63006 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lhx1P63006 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Lhx1P63006 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.1■□□□□ 0.81
Lhx1P63006 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lhx1P63006 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lhx1P63006 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lhx1P63006 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
Lhx1P63006 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.09■□□□□ 0.81
Lhx1P63006 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lhx1P63006 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lhx1P63006 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lhx1P63006 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lhx1P63006 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lhx1P63006 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lhx1P63006 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lhx1P63006 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Lhx1P63006 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lhx1P63006 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lhx1P63006 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Lhx1P63006 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Lhx1P63006 Gm15039-201ENSMUST00000118914 875 ntBASIC20.08■□□□□ 0.81
Lhx1P63006 Gm27454-201ENSMUST00000185090 204 ntBASIC20.08■□□□□ 0.81
Lhx1P63006 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.08■□□□□ 0.81
Lhx1P63006 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lhx1P63006 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lhx1P63006 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lhx1P63006 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lhx1P63006 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lhx1P63006 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Lhx1P63006 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lhx1P63006 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lhx1P63006 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lhx1P63006 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lhx1P63006 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lhx1P63006 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lhx1P63006 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lhx1P63006 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Lhx1P63006 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lhx1P63006 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Lhx1P63006 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Lhx1P63006 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Lhx1P63006 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lhx1P63006 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lhx1P63006 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Lhx1P63006 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.06■□□□□ 0.8
Lhx1P63006 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lhx1P63006 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Lhx1P63006 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Lhx1P63006 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Lhx1P63006 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.05■□□□□ 0.8
Lhx1P63006 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lhx1P63006 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Lhx1P63006 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Lhx1P63006 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lhx1P63006 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lhx1P63006 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Lhx1P63006 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Lhx1P63006 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lhx1P63006 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lhx1P63006 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lhx1P63006 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.04■□□□□ 0.8
Lhx1P63006 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Lhx1P63006 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms