Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lsm6P62313 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lsm6P62313 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lsm6P62313 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lsm6P62313 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Lsm6P62313 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lsm6P62313 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lsm6P62313 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Lsm6P62313 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Lsm6P62313 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Lsm6P62313 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.91■□□□□ 0.46
Lsm6P62313 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lsm6P62313 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lsm6P62313 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lsm6P62313 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Lsm6P62313 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Lsm6P62313 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lsm6P62313 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lsm6P62313 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Lsm6P62313 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lsm6P62313 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Lsm6P62313 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.9■□□□□ 0.46
Lsm6P62313 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lsm6P62313 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Lsm6P62313 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lsm6P62313 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lsm6P62313 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Lsm6P62313 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lsm6P62313 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Lsm6P62313 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.89■□□□□ 0.45
Lsm6P62313 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
Lsm6P62313 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Lsm6P62313 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lsm6P62313 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lsm6P62313 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lsm6P62313 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lsm6P62313 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lsm6P62313 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lsm6P62313 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lsm6P62313 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Lsm6P62313 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lsm6P62313 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lsm6P62313 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Lsm6P62313 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Lsm6P62313 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
Lsm6P62313 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.88■□□□□ 0.45
Lsm6P62313 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lsm6P62313 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lsm6P62313 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lsm6P62313 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lsm6P62313 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lsm6P62313 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Lsm6P62313 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.87■□□□□ 0.45
Lsm6P62313 Gm7143-201ENSMUST00000222811 859 ntBASIC17.87■□□□□ 0.45
Lsm6P62313 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lsm6P62313 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lsm6P62313 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Lsm6P62313 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lsm6P62313 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.87■□□□□ 0.45
Lsm6P62313 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Lsm6P62313 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.86■□□□□ 0.45
Lsm6P62313 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lsm6P62313 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Lsm6P62313 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lsm6P62313 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Lsm6P62313 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.85■□□□□ 0.45
Lsm6P62313 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Lsm6P62313 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lsm6P62313 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lsm6P62313 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.85■□□□□ 0.45
Lsm6P62313 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lsm6P62313 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lsm6P62313 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Lsm6P62313 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Lsm6P62313 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Lsm6P62313 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lsm6P62313 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lsm6P62313 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lsm6P62313 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.85■□□□□ 0.45
Lsm6P62313 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm6P62313 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm6P62313 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm6P62313 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm6P62313 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm6P62313 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm6P62313 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm6P62313 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.84■□□□□ 0.45
Lsm6P62313 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.84■□□□□ 0.45
Lsm6P62313 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm6P62313 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Lsm6P62313 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.84■□□□□ 0.45
Lsm6P62313 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm6P62313 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm6P62313 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.84■□□□□ 0.45
Lsm6P62313 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm6P62313 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm6P62313 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lsm6P62313 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Lsm6P62313 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lsm6P62313 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.83■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms