Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ube2d3P61079 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ube2d3P61079 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ube2d3P61079 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ube2d3P61079 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ube2d3P61079 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ube2d3P61079 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Ube2d3P61079 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ube2d3P61079 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ube2d3P61079 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ube2d3P61079 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ube2d3P61079 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ube2d3P61079 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ube2d3P61079 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ube2d3P61079 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ube2d3P61079 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ube2d3P61079 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ube2d3P61079 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC14.54□□□□□ -0.08
Ube2d3P61079 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ube2d3P61079 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ube2d3P61079 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ube2d3P61079 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ube2d3P61079 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ube2d3P61079 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ube2d3P61079 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ube2d3P61079 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ube2d3P61079 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ube2d3P61079 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC14.53□□□□□ -0.08
Ube2d3P61079 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ube2d3P61079 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ube2d3P61079 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ube2d3P61079 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ube2d3P61079 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ube2d3P61079 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ube2d3P61079 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ube2d3P61079 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ube2d3P61079 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ube2d3P61079 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ube2d3P61079 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ube2d3P61079 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Ube2d3P61079 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ube2d3P61079 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ube2d3P61079 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ube2d3P61079 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Ube2d3P61079 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.08
Ube2d3P61079 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ube2d3P61079 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ube2d3P61079 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ube2d3P61079 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ube2d3P61079 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ube2d3P61079 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Ube2d3P61079 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Ube2d3P61079 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC14.52□□□□□ -0.09
Ube2d3P61079 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ube2d3P61079 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ube2d3P61079 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ube2d3P61079 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ube2d3P61079 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ube2d3P61079 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ube2d3P61079 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC14.51□□□□□ -0.09
Ube2d3P61079 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ube2d3P61079 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ube2d3P61079 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ube2d3P61079 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ube2d3P61079 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ube2d3P61079 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ube2d3P61079 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ube2d3P61079 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ube2d3P61079 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ube2d3P61079 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ube2d3P61079 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Ube2d3P61079 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC14.5□□□□□ -0.09
Ube2d3P61079 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC14.5□□□□□ -0.09
Ube2d3P61079 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ube2d3P61079 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ube2d3P61079 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ube2d3P61079 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ube2d3P61079 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ube2d3P61079 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ube2d3P61079 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ube2d3P61079 Nsd1-203ENSMUST00000224156 1149 ntBASIC14.49□□□□□ -0.09
Ube2d3P61079 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ube2d3P61079 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC14.49□□□□□ -0.09
Ube2d3P61079 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC14.49□□□□□ -0.09
Ube2d3P61079 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ube2d3P61079 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ube2d3P61079 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ube2d3P61079 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.49□□□□□ -0.09
Ube2d3P61079 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ube2d3P61079 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ube2d3P61079 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ube2d3P61079 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ube2d3P61079 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ube2d3P61079 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ube2d3P61079 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ube2d3P61079 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ube2d3P61079 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ube2d3P61079 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ube2d3P61079 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Ube2d3P61079 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms