Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Nub1P54729 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Nub1P54729 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Nub1P54729 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Nub1P54729 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Nub1P54729 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Nub1P54729 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Nub1P54729 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Nub1P54729 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Nub1P54729 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Nub1P54729 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Nub1P54729 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Nub1P54729 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Nub1P54729 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Nub1P54729 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Nub1P54729 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Nub1P54729 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Nub1P54729 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Nub1P54729 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Nub1P54729 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Nub1P54729 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Nub1P54729 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Nub1P54729 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.93■■□□□ 1.1
Nub1P54729 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.93■■□□□ 1.1
Nub1P54729 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Nub1P54729 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.93■■□□□ 1.1
Nub1P54729 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Nub1P54729 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Nub1P54729 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.92■■□□□ 1.1
Nub1P54729 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nub1P54729 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nub1P54729 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nub1P54729 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nub1P54729 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nub1P54729 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Nub1P54729 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.91■■□□□ 1.1
Nub1P54729 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nub1P54729 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nub1P54729 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nub1P54729 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nub1P54729 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Nub1P54729 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nub1P54729 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.9■■□□□ 1.1
Nub1P54729 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
Nub1P54729 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
Nub1P54729 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
Nub1P54729 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
Nub1P54729 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Nub1P54729 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.89■■□□□ 1.09
Nub1P54729 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
Nub1P54729 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Nub1P54729 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.89■■□□□ 1.09
Nub1P54729 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Nub1P54729 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
Nub1P54729 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.89■■□□□ 1.09
Nub1P54729 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nub1P54729 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nub1P54729 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.88■■□□□ 1.09
Nub1P54729 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nub1P54729 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nub1P54729 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Nub1P54729 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Nub1P54729 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nub1P54729 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Nub1P54729 Gm7143-201ENSMUST00000222811 859 ntBASIC21.87■■□□□ 1.09
Nub1P54729 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nub1P54729 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nub1P54729 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.87■■□□□ 1.09
Nub1P54729 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Nub1P54729 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nub1P54729 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nub1P54729 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nub1P54729 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nub1P54729 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nub1P54729 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nub1P54729 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nub1P54729 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.86■■□□□ 1.09
Nub1P54729 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nub1P54729 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.86■■□□□ 1.09
Nub1P54729 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nub1P54729 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Nub1P54729 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
Nub1P54729 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Nub1P54729 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Nub1P54729 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nub1P54729 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.85■■□□□ 1.09
Nub1P54729 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Nub1P54729 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nub1P54729 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nub1P54729 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.85■■□□□ 1.09
Nub1P54729 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.85■■□□□ 1.09
Nub1P54729 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.85■■□□□ 1.09
Nub1P54729 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nub1P54729 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nub1P54729 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nub1P54729 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nub1P54729 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.84■■□□□ 1.09
Nub1P54729 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Nub1P54729 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nub1P54729 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms