Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
Msh6P54276 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Msh6P54276 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC26.31■■□□□ 1.8
Msh6P54276 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC26.31■■□□□ 1.8
Msh6P54276 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC26.31■■□□□ 1.8
Msh6P54276 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Msh6P54276 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Msh6P54276 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Msh6P54276 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Msh6P54276 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Msh6P54276 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Msh6P54276 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC26.3■■□□□ 1.8
Msh6P54276 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Msh6P54276 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Msh6P54276 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Msh6P54276 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Msh6P54276 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Msh6P54276 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Msh6P54276 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Msh6P54276 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Msh6P54276 Gm43759-201ENSMUST00000196925 1261 ntBASIC26.28■■□□□ 1.8
Msh6P54276 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC26.28■■□□□ 1.8
Msh6P54276 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC26.28■■□□□ 1.8
Msh6P54276 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Msh6P54276 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC26.27■■□□□ 1.8
Msh6P54276 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC26.27■■□□□ 1.8
Msh6P54276 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Msh6P54276 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC26.27■■□□□ 1.8
Msh6P54276 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Msh6P54276 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Msh6P54276 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Msh6P54276 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC26.26■■□□□ 1.79
Msh6P54276 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Msh6P54276 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Msh6P54276 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Msh6P54276 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Msh6P54276 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Msh6P54276 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Msh6P54276 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Msh6P54276 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
Msh6P54276 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Msh6P54276 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Msh6P54276 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC26.25■■□□□ 1.79
Msh6P54276 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC26.25■■□□□ 1.79
Msh6P54276 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Msh6P54276 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Msh6P54276 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Msh6P54276 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Msh6P54276 Gm7291-201ENSMUST00000199147 382 ntBASIC26.24■■□□□ 1.79
Msh6P54276 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Msh6P54276 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Msh6P54276 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Msh6P54276 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Msh6P54276 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Msh6P54276 Gm17641-201ENSMUST00000166328 2350 ntBASIC26.22■■□□□ 1.79
Msh6P54276 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Msh6P54276 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Msh6P54276 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Msh6P54276 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Msh6P54276 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Msh6P54276 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Msh6P54276 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC26.21■■□□□ 1.79
Msh6P54276 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC26.21■■□□□ 1.79
Msh6P54276 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC26.21■■□□□ 1.79
Msh6P54276 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Msh6P54276 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Msh6P54276 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC26.2■■□□□ 1.79
Msh6P54276 Cdc34b-202ENSMUST00000188741 1252 ntBASIC26.2■■□□□ 1.79
Msh6P54276 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Msh6P54276 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
Msh6P54276 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC26.2■■□□□ 1.79
Msh6P54276 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Msh6P54276 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
Msh6P54276 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
Msh6P54276 Gm26571-201ENSMUST00000181399 666 ntBASIC26.2■■□□□ 1.78
Msh6P54276 Gm6085-201ENSMUST00000182774 1470 ntBASIC26.19■■□□□ 1.78
Msh6P54276 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Msh6P54276 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Msh6P54276 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
Msh6P54276 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Msh6P54276 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Msh6P54276 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Msh6P54276 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Msh6P54276 Gm10849-201ENSMUST00000100397 618 ntBASIC26.18■■□□□ 1.78
Msh6P54276 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC26.18■■□□□ 1.78
Msh6P54276 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Msh6P54276 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
Msh6P54276 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Msh6P54276 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
Msh6P54276 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC26.17■■□□□ 1.78
Msh6P54276 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Msh6P54276 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC26.17■■□□□ 1.78
Msh6P54276 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Msh6P54276 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
Msh6P54276 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Msh6P54276 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Msh6P54276 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Msh6P54276 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
Msh6P54276 Spcs1-204ENSMUST00000226782 949 ntBASIC26.16■■□□□ 1.78
Msh6P54276 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms