Protein–RNA interactions for Protein: P35584

Foxa3, Hepatocyte nuclear factor 3-gamma, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa3P35584 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.09■□□□□ 0.33
Foxa3P35584 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxa3P35584 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Foxa3P35584 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Foxa3P35584 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Foxa3P35584 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Foxa3P35584 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Foxa3P35584 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Foxa3P35584 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Foxa3P35584 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Foxa3P35584 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Foxa3P35584 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.08■□□□□ 0.32
Foxa3P35584 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Foxa3P35584 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.08■□□□□ 0.32
Foxa3P35584 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Foxa3P35584 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxa3P35584 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Foxa3P35584 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxa3P35584 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxa3P35584 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Foxa3P35584 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Foxa3P35584 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.07■□□□□ 0.32
Foxa3P35584 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Foxa3P35584 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Foxa3P35584 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Foxa3P35584 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Foxa3P35584 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Foxa3P35584 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Foxa3P35584 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.06■□□□□ 0.32
Foxa3P35584 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Foxa3P35584 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Foxa3P35584 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxa3P35584 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxa3P35584 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.05■□□□□ 0.32
Foxa3P35584 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxa3P35584 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxa3P35584 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxa3P35584 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.05■□□□□ 0.32
Foxa3P35584 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.05■□□□□ 0.32
Foxa3P35584 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.05■□□□□ 0.32
Foxa3P35584 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxa3P35584 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxa3P35584 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Foxa3P35584 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxa3P35584 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxa3P35584 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxa3P35584 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxa3P35584 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxa3P35584 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxa3P35584 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxa3P35584 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxa3P35584 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Foxa3P35584 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.03■□□□□ 0.32
Foxa3P35584 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Foxa3P35584 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.03■□□□□ 0.32
Foxa3P35584 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Foxa3P35584 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Foxa3P35584 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Foxa3P35584 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Foxa3P35584 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Foxa3P35584 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Foxa3P35584 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.02■□□□□ 0.31
Foxa3P35584 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Foxa3P35584 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Foxa3P35584 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Foxa3P35584 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Foxa3P35584 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Foxa3P35584 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Foxa3P35584 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Foxa3P35584 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Foxa3P35584 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17■□□□□ 0.31
Foxa3P35584 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17■□□□□ 0.31
Foxa3P35584 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Foxa3P35584 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Foxa3P35584 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Foxa3P35584 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Foxa3P35584 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Foxa3P35584 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Foxa3P35584 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Foxa3P35584 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Foxa3P35584 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.99■□□□□ 0.31
Foxa3P35584 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC16.99■□□□□ 0.31
Foxa3P35584 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Foxa3P35584 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Foxa3P35584 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Foxa3P35584 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Foxa3P35584 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Foxa3P35584 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Foxa3P35584 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Foxa3P35584 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Foxa3P35584 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Foxa3P35584 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Foxa3P35584 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Foxa3P35584 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Foxa3P35584 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Foxa3P35584 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Foxa3P35584 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Foxa3P35584 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Foxa3P35584 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Foxa3P35584 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms