Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nfkb1P25799 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Nfkb1P25799 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Nfkb1P25799 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nfkb1P25799 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Nfkb1P25799 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
Nfkb1P25799 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.01■□□□□ 0.95
Nfkb1P25799 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Nfkb1P25799 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nfkb1P25799 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nfkb1P25799 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nfkb1P25799 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nfkb1P25799 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.01■□□□□ 0.95
Nfkb1P25799 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Nfkb1P25799 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Nfkb1P25799 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21■□□□□ 0.95
Nfkb1P25799 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nfkb1P25799 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nfkb1P25799 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nfkb1P25799 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nfkb1P25799 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21■□□□□ 0.95
Nfkb1P25799 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nfkb1P25799 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.99■□□□□ 0.95
Nfkb1P25799 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nfkb1P25799 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Nfkb1P25799 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nfkb1P25799 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nfkb1P25799 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nfkb1P25799 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nfkb1P25799 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nfkb1P25799 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.98■□□□□ 0.95
Nfkb1P25799 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nfkb1P25799 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nfkb1P25799 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nfkb1P25799 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nfkb1P25799 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nfkb1P25799 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Nfkb1P25799 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nfkb1P25799 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.98■□□□□ 0.95
Nfkb1P25799 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nfkb1P25799 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nfkb1P25799 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Nfkb1P25799 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nfkb1P25799 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Nfkb1P25799 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nfkb1P25799 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nfkb1P25799 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Nfkb1P25799 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nfkb1P25799 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nfkb1P25799 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Nfkb1P25799 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nfkb1P25799 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.96■□□□□ 0.95
Nfkb1P25799 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Nfkb1P25799 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.96■□□□□ 0.95
Nfkb1P25799 Gm6139-201ENSMUST00000079261 882 ntBASIC20.96■□□□□ 0.95
Nfkb1P25799 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Nfkb1P25799 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.96■□□□□ 0.95
Nfkb1P25799 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nfkb1P25799 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nfkb1P25799 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nfkb1P25799 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nfkb1P25799 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nfkb1P25799 Mir7075-201ENSMUST00000184187 82 ntBASIC20.95■□□□□ 0.94
Nfkb1P25799 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.95■□□□□ 0.94
Nfkb1P25799 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nfkb1P25799 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Nfkb1P25799 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nfkb1P25799 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.95■□□□□ 0.94
Nfkb1P25799 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Nfkb1P25799 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Nfkb1P25799 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nfkb1P25799 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nfkb1P25799 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nfkb1P25799 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
Nfkb1P25799 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.94■□□□□ 0.94
Nfkb1P25799 Gm43530-201ENSMUST00000195920 274 ntBASIC20.94■□□□□ 0.94
Nfkb1P25799 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nfkb1P25799 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.94■□□□□ 0.94
Nfkb1P25799 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.93■□□□□ 0.94
Nfkb1P25799 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nfkb1P25799 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nfkb1P25799 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nfkb1P25799 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nfkb1P25799 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nfkb1P25799 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.93■□□□□ 0.94
Nfkb1P25799 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nfkb1P25799 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nfkb1P25799 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nfkb1P25799 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.92■□□□□ 0.94
Nfkb1P25799 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nfkb1P25799 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nfkb1P25799 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Nfkb1P25799 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Nfkb1P25799 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nfkb1P25799 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.92■□□□□ 0.94
Nfkb1P25799 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nfkb1P25799 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nfkb1P25799 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.91■□□□□ 0.94
Nfkb1P25799 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nfkb1P25799 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms