Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Abcd4O89016 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Abcd4O89016 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Abcd4O89016 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Abcd4O89016 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Abcd4O89016 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Abcd4O89016 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Abcd4O89016 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Abcd4O89016 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Abcd4O89016 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Abcd4O89016 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Abcd4O89016 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Abcd4O89016 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.38■□□□□ 0.53
Abcd4O89016 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Abcd4O89016 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Abcd4O89016 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
Abcd4O89016 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Abcd4O89016 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Abcd4O89016 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Abcd4O89016 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Abcd4O89016 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Abcd4O89016 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Abcd4O89016 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Abcd4O89016 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Abcd4O89016 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Abcd4O89016 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Abcd4O89016 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Abcd4O89016 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Abcd4O89016 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Abcd4O89016 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Abcd4O89016 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Abcd4O89016 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.37■□□□□ 0.53
Abcd4O89016 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Abcd4O89016 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Abcd4O89016 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Abcd4O89016 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Abcd4O89016 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Abcd4O89016 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Abcd4O89016 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Abcd4O89016 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Abcd4O89016 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Abcd4O89016 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Abcd4O89016 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Abcd4O89016 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Abcd4O89016 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Abcd4O89016 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Abcd4O89016 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Abcd4O89016 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Abcd4O89016 Gm27454-201ENSMUST00000185090 204 ntBASIC18.34■□□□□ 0.53
Abcd4O89016 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Abcd4O89016 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Abcd4O89016 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.34■□□□□ 0.53
Abcd4O89016 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Abcd4O89016 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.33■□□□□ 0.53
Abcd4O89016 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Abcd4O89016 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Abcd4O89016 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Abcd4O89016 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.33■□□□□ 0.52
Abcd4O89016 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Abcd4O89016 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Abcd4O89016 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Abcd4O89016 Gm9870-201ENSMUST00000063874 645 ntBASIC18.33■□□□□ 0.52
Abcd4O89016 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Abcd4O89016 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Abcd4O89016 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.33■□□□□ 0.52
Abcd4O89016 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Abcd4O89016 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.32■□□□□ 0.52
Abcd4O89016 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Abcd4O89016 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.32■□□□□ 0.52
Abcd4O89016 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Abcd4O89016 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.32■□□□□ 0.52
Abcd4O89016 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Abcd4O89016 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Abcd4O89016 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Abcd4O89016 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Abcd4O89016 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Abcd4O89016 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Abcd4O89016 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Abcd4O89016 Iqck-206ENSMUST00000208658 2891 ntBASIC18.31■□□□□ 0.52
Abcd4O89016 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Abcd4O89016 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Abcd4O89016 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Abcd4O89016 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Abcd4O89016 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
Abcd4O89016 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Abcd4O89016 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Abcd4O89016 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Abcd4O89016 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Abcd4O89016 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Abcd4O89016 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.3■□□□□ 0.52
Abcd4O89016 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.3■□□□□ 0.52
Abcd4O89016 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Abcd4O89016 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Abcd4O89016 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Abcd4O89016 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Abcd4O89016 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.3■□□□□ 0.52
Abcd4O89016 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Abcd4O89016 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Abcd4O89016 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abcd4O89016 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms