Protein–RNA interactions for Protein: O88888

Apba3, Amyloid-beta A4 precursor protein-binding family A member 3, mousemouse

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apba3O88888 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Apba3O88888 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Apba3O88888 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Apba3O88888 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Apba3O88888 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Apba3O88888 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC22.44■■□□□ 1.18
Apba3O88888 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC22.44■■□□□ 1.18
Apba3O88888 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
Apba3O88888 Gm43530-201ENSMUST00000195920 274 ntBASIC22.44■■□□□ 1.18
Apba3O88888 Gm17641-201ENSMUST00000166328 2350 ntBASIC22.43■■□□□ 1.18
Apba3O88888 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Apba3O88888 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Apba3O88888 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Apba3O88888 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Apba3O88888 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC22.43■■□□□ 1.18
Apba3O88888 AC166356.1-201ENSMUST00000228236 1426 ntBASIC22.43■■□□□ 1.18
Apba3O88888 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Apba3O88888 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Apba3O88888 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC22.43■■□□□ 1.18
Apba3O88888 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC22.43■■□□□ 1.18
Apba3O88888 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Apba3O88888 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Apba3O88888 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Apba3O88888 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC22.42■■□□□ 1.18
Apba3O88888 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Apba3O88888 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Apba3O88888 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Apba3O88888 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Apba3O88888 Gm6139-201ENSMUST00000079261 882 ntBASIC22.41■■□□□ 1.18
Apba3O88888 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Apba3O88888 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Apba3O88888 Gm5913-201ENSMUST00000119397 1399 ntBASIC22.4■■□□□ 1.18
Apba3O88888 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Apba3O88888 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Apba3O88888 Mir7075-201ENSMUST00000184187 82 ntBASIC22.4■■□□□ 1.18
Apba3O88888 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Apba3O88888 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Apba3O88888 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Apba3O88888 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Apba3O88888 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC22.4■■□□□ 1.18
Apba3O88888 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
Apba3O88888 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Apba3O88888 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Apba3O88888 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Apba3O88888 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
Apba3O88888 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Apba3O88888 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC22.39■■□□□ 1.17
Apba3O88888 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Apba3O88888 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC22.38■■□□□ 1.17
Apba3O88888 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Apba3O88888 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Apba3O88888 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Apba3O88888 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Apba3O88888 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Apba3O88888 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Apba3O88888 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC22.38■■□□□ 1.17
Apba3O88888 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Apba3O88888 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Apba3O88888 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Apba3O88888 Gm43759-201ENSMUST00000196925 1261 ntBASIC22.37■■□□□ 1.17
Apba3O88888 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Apba3O88888 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Apba3O88888 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Apba3O88888 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Apba3O88888 Dmtn-209ENSMUST00000228295 2572 ntBASIC22.36■■□□□ 1.17
Apba3O88888 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Apba3O88888 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.35■■□□□ 1.17
Apba3O88888 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC22.35■■□□□ 1.17
Apba3O88888 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Apba3O88888 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Apba3O88888 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Apba3O88888 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Apba3O88888 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Apba3O88888 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Apba3O88888 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Apba3O88888 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC22.34■■□□□ 1.17
Apba3O88888 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Apba3O88888 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
Apba3O88888 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Apba3O88888 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Apba3O88888 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Apba3O88888 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Apba3O88888 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Apba3O88888 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Apba3O88888 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Apba3O88888 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.33■■□□□ 1.16
Apba3O88888 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Apba3O88888 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC22.32■■□□□ 1.16
Apba3O88888 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Apba3O88888 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Apba3O88888 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Apba3O88888 Gm12251-201ENSMUST00000117893 792 ntBASIC22.32■■□□□ 1.16
Apba3O88888 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC22.32■■□□□ 1.16
Apba3O88888 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC22.32■■□□□ 1.16
Apba3O88888 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Apba3O88888 Gm5576-201ENSMUST00000075809 1236 ntBASIC22.32■■□□□ 1.16
Apba3O88888 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Apba3O88888 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Apba3O88888 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC22.31■■□□□ 1.16
Apba3O88888 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms