Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Best1O88870 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Best1O88870 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Best1O88870 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Best1O88870 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.77■□□□□ 0.76
Best1O88870 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.77■□□□□ 0.76
Best1O88870 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.77■□□□□ 0.76
Best1O88870 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
Best1O88870 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Best1O88870 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Best1O88870 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Best1O88870 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Best1O88870 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Best1O88870 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Best1O88870 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Best1O88870 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Best1O88870 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Best1O88870 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Best1O88870 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Best1O88870 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Best1O88870 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Best1O88870 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Best1O88870 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Best1O88870 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Best1O88870 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Best1O88870 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Best1O88870 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Best1O88870 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.75■□□□□ 0.75
Best1O88870 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.75■□□□□ 0.75
Best1O88870 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Best1O88870 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Best1O88870 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Best1O88870 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Best1O88870 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Best1O88870 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Best1O88870 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.74■□□□□ 0.75
Best1O88870 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Best1O88870 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Best1O88870 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Best1O88870 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Best1O88870 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Best1O88870 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Best1O88870 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Best1O88870 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Best1O88870 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Best1O88870 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.73■□□□□ 0.75
Best1O88870 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Best1O88870 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Best1O88870 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Best1O88870 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Best1O88870 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Best1O88870 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.72■□□□□ 0.75
Best1O88870 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Best1O88870 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.72■□□□□ 0.75
Best1O88870 Mir7075-201ENSMUST00000184187 82 ntBASIC19.72■□□□□ 0.75
Best1O88870 Gm6139-201ENSMUST00000079261 882 ntBASIC19.72■□□□□ 0.75
Best1O88870 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Best1O88870 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.72■□□□□ 0.75
Best1O88870 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Best1O88870 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Best1O88870 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Best1O88870 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Best1O88870 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Best1O88870 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.71■□□□□ 0.75
Best1O88870 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Best1O88870 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.7■□□□□ 0.74
Best1O88870 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Best1O88870 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Best1O88870 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Best1O88870 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Best1O88870 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Best1O88870 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Best1O88870 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Best1O88870 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Best1O88870 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Best1O88870 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Best1O88870 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Best1O88870 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Best1O88870 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Best1O88870 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Best1O88870 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Best1O88870 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.69■□□□□ 0.74
Best1O88870 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Best1O88870 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Best1O88870 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Best1O88870 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Best1O88870 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Best1O88870 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Best1O88870 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.68■□□□□ 0.74
Best1O88870 Serp2-204ENSMUST00000228055 705 ntBASIC19.68■□□□□ 0.74
Best1O88870 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Best1O88870 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Best1O88870 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Best1O88870 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Best1O88870 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Best1O88870 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Best1O88870 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Best1O88870 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Best1O88870 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Best1O88870 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms