Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdh16O88338 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdh16O88338 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Cdh16O88338 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdh16O88338 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cdh16O88338 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cdh16O88338 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdh16O88338 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdh16O88338 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdh16O88338 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.94■□□□□ 0.78
Cdh16O88338 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdh16O88338 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdh16O88338 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.94■□□□□ 0.78
Cdh16O88338 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Cdh16O88338 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdh16O88338 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.93■□□□□ 0.78
Cdh16O88338 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdh16O88338 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdh16O88338 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdh16O88338 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdh16O88338 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdh16O88338 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdh16O88338 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdh16O88338 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdh16O88338 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdh16O88338 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cdh16O88338 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdh16O88338 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdh16O88338 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdh16O88338 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Cdh16O88338 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Cdh16O88338 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.92■□□□□ 0.78
Cdh16O88338 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdh16O88338 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdh16O88338 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.91■□□□□ 0.78
Cdh16O88338 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Cdh16O88338 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.91■□□□□ 0.78
Cdh16O88338 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdh16O88338 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdh16O88338 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.91■□□□□ 0.78
Cdh16O88338 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cdh16O88338 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdh16O88338 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Cdh16O88338 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh16O88338 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh16O88338 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh16O88338 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh16O88338 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh16O88338 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh16O88338 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh16O88338 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh16O88338 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh16O88338 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh16O88338 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Cdh16O88338 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh16O88338 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.9■□□□□ 0.78
Cdh16O88338 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cdh16O88338 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Cdh16O88338 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cdh16O88338 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdh16O88338 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdh16O88338 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdh16O88338 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdh16O88338 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdh16O88338 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdh16O88338 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdh16O88338 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.88■□□□□ 0.77
Cdh16O88338 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdh16O88338 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cdh16O88338 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cdh16O88338 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdh16O88338 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdh16O88338 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdh16O88338 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cdh16O88338 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdh16O88338 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cdh16O88338 Gm11175-201ENSMUST00000116172 543 ntBASIC19.87■□□□□ 0.77
Cdh16O88338 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Cdh16O88338 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdh16O88338 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdh16O88338 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdh16O88338 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdh16O88338 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdh16O88338 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdh16O88338 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdh16O88338 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.86■□□□□ 0.77
Cdh16O88338 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdh16O88338 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cdh16O88338 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdh16O88338 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Cdh16O88338 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cdh16O88338 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cdh16O88338 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdh16O88338 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Cdh16O88338 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cdh16O88338 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cdh16O88338 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdh16O88338 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cdh16O88338 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdh16O88338 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms