Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Ubr1O70481 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Ubr1O70481 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC27.16■■□□□ 1.94
Ubr1O70481 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Ubr1O70481 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC27.15■■□□□ 1.94
Ubr1O70481 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ubr1O70481 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC27.15■■□□□ 1.94
Ubr1O70481 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ubr1O70481 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Ubr1O70481 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ubr1O70481 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ubr1O70481 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Ubr1O70481 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Ubr1O70481 Gm43403-201ENSMUST00000198011 1786 ntBASIC27.14■■□□□ 1.94
Ubr1O70481 Gm37415-201ENSMUST00000192265 2054 ntBASIC27.14■■□□□ 1.94
Ubr1O70481 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Ubr1O70481 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Ubr1O70481 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC27.14■■□□□ 1.93
Ubr1O70481 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Ubr1O70481 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Ubr1O70481 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Ubr1O70481 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC27.12■■□□□ 1.93
Ubr1O70481 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Ubr1O70481 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Ubr1O70481 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Ubr1O70481 Gm10209-201ENSMUST00000203397 1607 ntBASIC27.12■■□□□ 1.93
Ubr1O70481 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
Ubr1O70481 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Ubr1O70481 AC165080.2-201ENSMUST00000217491 1530 ntBASIC27.12■■□□□ 1.93
Ubr1O70481 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Ubr1O70481 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Ubr1O70481 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Ubr1O70481 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
Ubr1O70481 Gm5874-201ENSMUST00000096101 508 ntBASIC27.11■■□□□ 1.93
Ubr1O70481 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
Ubr1O70481 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Ubr1O70481 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Ubr1O70481 Gm10129-202ENSMUST00000193100 1316 ntBASIC27.1■■□□□ 1.93
Ubr1O70481 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Ubr1O70481 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Ubr1O70481 Gm10849-201ENSMUST00000100397 618 ntBASIC27.09■■□□□ 1.93
Ubr1O70481 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC27.09■■□□□ 1.93
Ubr1O70481 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC27.09■■□□□ 1.93
Ubr1O70481 Smad6-203ENSMUST00000179458 273 ntBASIC27.09■■□□□ 1.93
Ubr1O70481 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Ubr1O70481 Gm10493-201ENSMUST00000097270 612 ntBASIC27.09■■□□□ 1.93
Ubr1O70481 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Ubr1O70481 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
Ubr1O70481 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC27.09■■□□□ 1.93
Ubr1O70481 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
Ubr1O70481 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Ubr1O70481 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Ubr1O70481 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Ubr1O70481 Gm29257-201ENSMUST00000186115 639 ntBASIC27.07■■□□□ 1.92
Ubr1O70481 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ubr1O70481 Gm27045-201ENSMUST00000182145 1402 ntBASIC27.07■■□□□ 1.92
Ubr1O70481 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ubr1O70481 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Ubr1O70481 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ubr1O70481 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Ubr1O70481 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC27.06■■□□□ 1.92
Ubr1O70481 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Ubr1O70481 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
Ubr1O70481 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
Ubr1O70481 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC27.05■■□□□ 1.92
Ubr1O70481 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Ubr1O70481 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Ubr1O70481 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC27.05■■□□□ 1.92
Ubr1O70481 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Ubr1O70481 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC27.04■■□□□ 1.92
Ubr1O70481 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC27.04■■□□□ 1.92
Ubr1O70481 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Ubr1O70481 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
Ubr1O70481 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Ubr1O70481 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Ubr1O70481 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC27.04■■□□□ 1.92
Ubr1O70481 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Ubr1O70481 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC27.04■■□□□ 1.92
Ubr1O70481 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Ubr1O70481 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Ubr1O70481 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Ubr1O70481 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Ubr1O70481 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
Ubr1O70481 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Ubr1O70481 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Ubr1O70481 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Ubr1O70481 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC27.02■■□□□ 1.92
Ubr1O70481 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Ubr1O70481 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC27.02■■□□□ 1.92
Ubr1O70481 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Ubr1O70481 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Ubr1O70481 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Ubr1O70481 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Ubr1O70481 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Ubr1O70481 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Ubr1O70481 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC27.02■■□□□ 1.92
Ubr1O70481 AC099934.2-201ENSMUST00000196389 70 ntBASIC27.02■■□□□ 1.92
Ubr1O70481 AC156953.1-201ENSMUST00000196953 70 ntBASIC27.02■■□□□ 1.92
Ubr1O70481 AC157822.2-201ENSMUST00000200291 70 ntBASIC27.02■■□□□ 1.92
Ubr1O70481 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Retrieved 100 of 76,532 protein–RNA pairs in 289.5 ms