Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Spcs1-204ENSMUST00000226782 949 ntBASIC20.56■□□□□ 0.88
Gm3854A0A1B0GSS6 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Gm3854A0A1B0GSS6 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm3854A0A1B0GSS6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm3854A0A1B0GSS6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Gm3854A0A1B0GSS6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.55■□□□□ 0.88
Gm3854A0A1B0GSS6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Gm3854A0A1B0GSS6 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Gm3854A0A1B0GSS6 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Gm3854A0A1B0GSS6 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.55■□□□□ 0.88
Gm3854A0A1B0GSS6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.55■□□□□ 0.88
Gm3854A0A1B0GSS6 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Gm3854A0A1B0GSS6 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm3854A0A1B0GSS6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Gm3854A0A1B0GSS6 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Gm3854A0A1B0GSS6 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm3854A0A1B0GSS6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Gm3854A0A1B0GSS6 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm3854A0A1B0GSS6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.53■□□□□ 0.88
Gm3854A0A1B0GSS6 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm3854A0A1B0GSS6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Gm3854A0A1B0GSS6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.52■□□□□ 0.88
Gm3854A0A1B0GSS6 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gm3854A0A1B0GSS6 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gm3854A0A1B0GSS6 Gm29257-201ENSMUST00000186115 639 ntBASIC20.52■□□□□ 0.88
Gm3854A0A1B0GSS6 Gm43060-201ENSMUST00000200621 289 ntBASIC20.52■□□□□ 0.88
Gm3854A0A1B0GSS6 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.52■□□□□ 0.88
Gm3854A0A1B0GSS6 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3854A0A1B0GSS6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3854A0A1B0GSS6 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.51■□□□□ 0.87
Gm3854A0A1B0GSS6 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.51■□□□□ 0.87
Gm3854A0A1B0GSS6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3854A0A1B0GSS6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3854A0A1B0GSS6 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3854A0A1B0GSS6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3854A0A1B0GSS6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Gm3854A0A1B0GSS6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3854A0A1B0GSS6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3854A0A1B0GSS6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm3854A0A1B0GSS6 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm3854A0A1B0GSS6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.5■□□□□ 0.87
Gm3854A0A1B0GSS6 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm3854A0A1B0GSS6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gm3854A0A1B0GSS6 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.5■□□□□ 0.87
Gm3854A0A1B0GSS6 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Gm3854A0A1B0GSS6 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm3854A0A1B0GSS6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm3854A0A1B0GSS6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Gm3854A0A1B0GSS6 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Gm3854A0A1B0GSS6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm3854A0A1B0GSS6 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm3854A0A1B0GSS6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm3854A0A1B0GSS6 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Gm3854A0A1B0GSS6 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Gm3854A0A1B0GSS6 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.48■□□□□ 0.87
Gm3854A0A1B0GSS6 Gm40848-201ENSMUST00000221998 324 ntBASIC20.48■□□□□ 0.87
Gm3854A0A1B0GSS6 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm3854A0A1B0GSS6 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm3854A0A1B0GSS6 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm3854A0A1B0GSS6 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm3854A0A1B0GSS6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm3854A0A1B0GSS6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm3854A0A1B0GSS6 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm3854A0A1B0GSS6 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Gm3854A0A1B0GSS6 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm3854A0A1B0GSS6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm3854A0A1B0GSS6 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Gm3854A0A1B0GSS6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Gm3854A0A1B0GSS6 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Gm3854A0A1B0GSS6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Gm3854A0A1B0GSS6 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm3854A0A1B0GSS6 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Gm3854A0A1B0GSS6 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm3854A0A1B0GSS6 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm3854A0A1B0GSS6 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm3854A0A1B0GSS6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Gm3854A0A1B0GSS6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.47■□□□□ 0.87
Gm3854A0A1B0GSS6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Gm3854A0A1B0GSS6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm3854A0A1B0GSS6 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm3854A0A1B0GSS6 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.46■□□□□ 0.87
Gm3854A0A1B0GSS6 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Gm3854A0A1B0GSS6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm3854A0A1B0GSS6 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm3854A0A1B0GSS6 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Gm3854A0A1B0GSS6 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.45■□□□□ 0.87
Gm3854A0A1B0GSS6 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3854A0A1B0GSS6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3854A0A1B0GSS6 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3854A0A1B0GSS6 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Gm3854A0A1B0GSS6 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3854A0A1B0GSS6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.45■□□□□ 0.86
Gm3854A0A1B0GSS6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3854A0A1B0GSS6 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3854A0A1B0GSS6 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3854A0A1B0GSS6 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3854A0A1B0GSS6 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3854A0A1B0GSS6 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3854A0A1B0GSS6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Gm3854A0A1B0GSS6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms