Protein–RNA interactions for Protein: A0A0G2JFC6

Igkv4-53, Immunoglobulin kappa variable 4-53 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-53A0A0G2JFC6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.42□□□□□ -0.1
Igkv4-53A0A0G2JFC6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC14.42□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC14.41□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Igkv4-53A0A0G2JFC6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC14.41□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC14.4□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Gm16464-201ENSMUST00000117815 1095 ntBASIC14.4□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC14.4□□□□□ -0.1
Igkv4-53A0A0G2JFC6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Igkv4-53A0A0G2JFC6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Kdm3b-204ENSMUST00000224715 2032 ntBASIC14.39□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC14.39□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Igkv4-53A0A0G2JFC6 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC14.38□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Igkv4-53A0A0G2JFC6 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Gm38160-201ENSMUST00000193090 2499 ntBASIC14.38□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.36□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Gm44949-201ENSMUST00000206423 1450 ntBASIC14.36□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Igkv4-53A0A0G2JFC6 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Igkv4-53A0A0G2JFC6 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Igkv4-53A0A0G2JFC6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Igkv4-53A0A0G2JFC6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC14.34□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Igkv4-53A0A0G2JFC6 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Igkv4-53A0A0G2JFC6 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms