Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.55■□□□□ 0.24
Trav6d-5A0A075B6B9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6d-5A0A075B6B9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6d-5A0A075B6B9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6d-5A0A075B6B9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6d-5A0A075B6B9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6d-5A0A075B6B9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6d-5A0A075B6B9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6d-5A0A075B6B9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6d-5A0A075B6B9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6d-5A0A075B6B9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6d-5A0A075B6B9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6d-5A0A075B6B9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6d-5A0A075B6B9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6d-5A0A075B6B9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6d-5A0A075B6B9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trav6d-5A0A075B6B9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6d-5A0A075B6B9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Trav6d-5A0A075B6B9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6d-5A0A075B6B9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Trav6d-5A0A075B6B9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6d-5A0A075B6B9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trav6d-5A0A075B6B9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6d-5A0A075B6B9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6d-5A0A075B6B9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6d-5A0A075B6B9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6d-5A0A075B6B9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6d-5A0A075B6B9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6d-5A0A075B6B9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6d-5A0A075B6B9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.52■□□□□ 0.24
Trav6d-5A0A075B6B9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC16.52■□□□□ 0.24
Trav6d-5A0A075B6B9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.52■□□□□ 0.24
Trav6d-5A0A075B6B9 Gm9806-201ENSMUST00000051080 552 ntBASIC16.52■□□□□ 0.24
Trav6d-5A0A075B6B9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6d-5A0A075B6B9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6d-5A0A075B6B9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav6d-5A0A075B6B9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav6d-5A0A075B6B9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav6d-5A0A075B6B9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav6d-5A0A075B6B9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.51■□□□□ 0.23
Trav6d-5A0A075B6B9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6d-5A0A075B6B9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Trav6d-5A0A075B6B9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6d-5A0A075B6B9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6d-5A0A075B6B9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6d-5A0A075B6B9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6d-5A0A075B6B9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6d-5A0A075B6B9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6d-5A0A075B6B9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6d-5A0A075B6B9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6d-5A0A075B6B9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6d-5A0A075B6B9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6d-5A0A075B6B9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6d-5A0A075B6B9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trav6d-5A0A075B6B9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6d-5A0A075B6B9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6d-5A0A075B6B9 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC16.5■□□□□ 0.23
Trav6d-5A0A075B6B9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC16.5■□□□□ 0.23
Trav6d-5A0A075B6B9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6d-5A0A075B6B9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6d-5A0A075B6B9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trav6d-5A0A075B6B9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6d-5A0A075B6B9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6d-5A0A075B6B9 Scarna2-201ENSMUST00000157560 414 ntBASIC16.49■□□□□ 0.23
Trav6d-5A0A075B6B9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6d-5A0A075B6B9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6d-5A0A075B6B9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6d-5A0A075B6B9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6d-5A0A075B6B9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.48■□□□□ 0.23
Trav6d-5A0A075B6B9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6d-5A0A075B6B9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6d-5A0A075B6B9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6d-5A0A075B6B9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6d-5A0A075B6B9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav6d-5A0A075B6B9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.48■□□□□ 0.23
Trav6d-5A0A075B6B9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6d-5A0A075B6B9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trav6d-5A0A075B6B9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6d-5A0A075B6B9 Gm16437-201ENSMUST00000025669 507 ntBASIC16.48■□□□□ 0.23
Trav6d-5A0A075B6B9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.48■□□□□ 0.23
Trav6d-5A0A075B6B9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6d-5A0A075B6B9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6d-5A0A075B6B9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6d-5A0A075B6B9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6d-5A0A075B6B9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Trav6d-5A0A075B6B9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6d-5A0A075B6B9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Trav6d-5A0A075B6B9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6d-5A0A075B6B9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6d-5A0A075B6B9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6d-5A0A075B6B9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6d-5A0A075B6B9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6d-5A0A075B6B9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6d-5A0A075B6B9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6d-5A0A075B6B9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trav6d-5A0A075B6B9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trav6d-5A0A075B6B9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6d-5A0A075B6B9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6d-5A0A075B6B9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.46■□□□□ 0.23
Trav6d-5A0A075B6B9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms