Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav5-1A0A075B5Z7 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav5-1A0A075B5Z7 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav5-1A0A075B5Z7 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav5-1A0A075B5Z7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trav5-1A0A075B5Z7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav5-1A0A075B5Z7 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav5-1A0A075B5Z7 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Trav5-1A0A075B5Z7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Trav5-1A0A075B5Z7 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Trav5-1A0A075B5Z7 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav5-1A0A075B5Z7 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav5-1A0A075B5Z7 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav5-1A0A075B5Z7 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav5-1A0A075B5Z7 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav5-1A0A075B5Z7 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.6■□□□□ 0.41
Trav5-1A0A075B5Z7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav5-1A0A075B5Z7 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trav5-1A0A075B5Z7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trav5-1A0A075B5Z7 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav5-1A0A075B5Z7 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav5-1A0A075B5Z7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.59■□□□□ 0.41
Trav5-1A0A075B5Z7 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav5-1A0A075B5Z7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.59■□□□□ 0.41
Trav5-1A0A075B5Z7 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.59■□□□□ 0.41
Trav5-1A0A075B5Z7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav5-1A0A075B5Z7 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Trav5-1A0A075B5Z7 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav5-1A0A075B5Z7 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav5-1A0A075B5Z7 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav5-1A0A075B5Z7 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav5-1A0A075B5Z7 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trav5-1A0A075B5Z7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.58■□□□□ 0.4
Trav5-1A0A075B5Z7 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav5-1A0A075B5Z7 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav5-1A0A075B5Z7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav5-1A0A075B5Z7 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav5-1A0A075B5Z7 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav5-1A0A075B5Z7 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav5-1A0A075B5Z7 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
Trav5-1A0A075B5Z7 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav5-1A0A075B5Z7 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav5-1A0A075B5Z7 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.57■□□□□ 0.4
Trav5-1A0A075B5Z7 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav5-1A0A075B5Z7 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav5-1A0A075B5Z7 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav5-1A0A075B5Z7 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.57■□□□□ 0.4
Trav5-1A0A075B5Z7 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trav5-1A0A075B5Z7 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav5-1A0A075B5Z7 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav5-1A0A075B5Z7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav5-1A0A075B5Z7 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav5-1A0A075B5Z7 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav5-1A0A075B5Z7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav5-1A0A075B5Z7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav5-1A0A075B5Z7 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav5-1A0A075B5Z7 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav5-1A0A075B5Z7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav5-1A0A075B5Z7 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav5-1A0A075B5Z7 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav5-1A0A075B5Z7 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trav5-1A0A075B5Z7 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.55■□□□□ 0.4
Trav5-1A0A075B5Z7 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav5-1A0A075B5Z7 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav5-1A0A075B5Z7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.55■□□□□ 0.4
Trav5-1A0A075B5Z7 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.55■□□□□ 0.4
Trav5-1A0A075B5Z7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav5-1A0A075B5Z7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav5-1A0A075B5Z7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trav5-1A0A075B5Z7 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav5-1A0A075B5Z7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav5-1A0A075B5Z7 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav5-1A0A075B5Z7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav5-1A0A075B5Z7 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav5-1A0A075B5Z7 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav5-1A0A075B5Z7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav5-1A0A075B5Z7 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav5-1A0A075B5Z7 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav5-1A0A075B5Z7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.54■□□□□ 0.4
Trav5-1A0A075B5Z7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.54■□□□□ 0.4
Trav5-1A0A075B5Z7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav5-1A0A075B5Z7 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.53■□□□□ 0.4
Trav5-1A0A075B5Z7 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav5-1A0A075B5Z7 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trav5-1A0A075B5Z7 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav5-1A0A075B5Z7 Gm15039-201ENSMUST00000118914 875 ntBASIC17.53■□□□□ 0.4
Trav5-1A0A075B5Z7 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.53■□□□□ 0.4
Trav5-1A0A075B5Z7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav5-1A0A075B5Z7 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Trav5-1A0A075B5Z7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.53■□□□□ 0.4
Trav5-1A0A075B5Z7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav5-1A0A075B5Z7 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trav5-1A0A075B5Z7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav5-1A0A075B5Z7 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav5-1A0A075B5Z7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav5-1A0A075B5Z7 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav5-1A0A075B5Z7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trav5-1A0A075B5Z7 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav5-1A0A075B5Z7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trav5-1A0A075B5Z7 Gm27454-201ENSMUST00000185090 204 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms