Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Mir1247-201ENSMUST00000116706 82 ntBASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm2639-201ENSMUST00000156881 1297 ntBASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm25043-201ENSMUST00000158604 212 ntBASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm5597-201ENSMUST00000182353 1193 ntBASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm9004-201ENSMUST00000218739 1222 ntBASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm18065-201ENSMUST00000221395 526 ntBASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 AC167565.1-201ENSMUST00000226980 1833 ntBASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm29358-202ENSMUST00000187941 3227 ntBASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm4366-201ENSMUST00000201488 1342 ntBASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm24845-201ENSMUST00000158034 109 ntBASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Snora73a-201ENSMUST00000082453 205 ntBASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm37954-201ENSMUST00000195400 2071 ntBASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 AC124433.1-202ENSMUST00000224762 1535 ntBASIC8.99□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms