Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
HIST1H2ABP04908 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HIST1H2ABP04908 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
HIST1H2ABP04908 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.52□□□□□ -0.24
HIST1H2ABP04908 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 TERF1P3-201ENST00000505638 1227 ntBASIC13.52□□□□□ -0.25
HIST1H2ABP04908 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 SPCS2P1-201ENST00000561636 679 ntBASIC13.52□□□□□ -0.25
HIST1H2ABP04908 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 MIR4745-201ENST00000577608 62 ntBASIC13.52□□□□□ -0.25
HIST1H2ABP04908 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 CTBP2P3-201ENST00000585629 1255 ntBASIC13.52□□□□□ -0.25
HIST1H2ABP04908 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 AC015802.1-201ENST00000588104 1449 ntBASIC13.52□□□□□ -0.25
HIST1H2ABP04908 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 AL354702.1-201ENST00000442006 1960 ntBASIC13.52□□□□□ -0.25
HIST1H2ABP04908 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 AC097359.2-201ENST00000604992 2389 ntBASIC13.52□□□□□ -0.25
HIST1H2ABP04908 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST1H2ABP04908 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 EIF3FP3-201ENST00000434851 1086 ntBASIC13.51□□□□□ -0.25
HIST1H2ABP04908 AC093433.1-201ENST00000458048 571 ntBASIC13.51□□□□□ -0.25
HIST1H2ABP04908 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 WFDC1-204ENST00000613603 549 ntBASIC13.51□□□□□ -0.25
HIST1H2ABP04908 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2ABP04908 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms