Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ebf3O08791 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Ebf3O08791 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.08□□□□□ -0.48
Ebf3O08791 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.08□□□□□ -0.48
Ebf3O08791 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.08□□□□□ -0.48
Ebf3O08791 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.08□□□□□ -0.48
Ebf3O08791 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf3O08791 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Ebf3O08791 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf3O08791 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Ebf3O08791 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf3O08791 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf3O08791 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf3O08791 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf3O08791 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ebf3O08791 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ebf3O08791 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.08□□□□□ -0.48
Ebf3O08791 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf3O08791 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.07□□□□□ -0.48
Ebf3O08791 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Ebf3O08791 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ebf3O08791 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.07□□□□□ -0.48
Ebf3O08791 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Ebf3O08791 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.07□□□□□ -0.48
Ebf3O08791 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf3O08791 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.07□□□□□ -0.48
Ebf3O08791 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf3O08791 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf3O08791 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ebf3O08791 Gm25076-201ENSMUST00000104098 132 ntBASIC12.07□□□□□ -0.48
Ebf3O08791 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ebf3O08791 Gm22711-201ENSMUST00000116890 133 ntBASIC12.07□□□□□ -0.48
Ebf3O08791 Gm16166-201ENSMUST00000118291 787 ntBASIC12.07□□□□□ -0.48
Ebf3O08791 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.07□□□□□ -0.48
Ebf3O08791 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.07□□□□□ -0.48
Ebf3O08791 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Ebf3O08791 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf3O08791 Mir1956-201ENSMUST00000157748 65 ntBASIC12.07□□□□□ -0.48
Ebf3O08791 Gm24844-201ENSMUST00000158679 127 ntBASIC12.07□□□□□ -0.48
Ebf3O08791 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.07□□□□□ -0.48
Ebf3O08791 Gm28388-201ENSMUST00000186262 437 ntBASIC12.07□□□□□ -0.48
Ebf3O08791 Gm17877-201ENSMUST00000192578 814 ntBASIC12.07□□□□□ -0.48
Ebf3O08791 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ebf3O08791 Gm42518-201ENSMUST00000196277 938 ntBASIC12.07□□□□□ -0.48
Ebf3O08791 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf3O08791 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ebf3O08791 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.07□□□□□ -0.48
Ebf3O08791 Gm44506-201ENSMUST00000206278 965 ntBASIC12.07□□□□□ -0.48
Ebf3O08791 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.07□□□□□ -0.48
Ebf3O08791 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.07□□□□□ -0.48
Ebf3O08791 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf3O08791 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.07□□□□□ -0.48
Ebf3O08791 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.07□□□□□ -0.48
Ebf3O08791 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ebf3O08791 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.07□□□□□ -0.48
Ebf3O08791 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf3O08791 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf3O08791 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf3O08791 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf3O08791 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf3O08791 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf3O08791 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf3O08791 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf3O08791 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf3O08791 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf3O08791 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.07□□□□□ -0.48
Ebf3O08791 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ebf3O08791 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf3O08791 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.07□□□□□ -0.48
Ebf3O08791 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf3O08791 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf3O08791 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ebf3O08791 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf3O08791 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.06□□□□□ -0.48
Ebf3O08791 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.06□□□□□ -0.48
Ebf3O08791 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf3O08791 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.06□□□□□ -0.48
Ebf3O08791 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf3O08791 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Ebf3O08791 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf3O08791 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf3O08791 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf3O08791 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.06□□□□□ -0.48
Ebf3O08791 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf3O08791 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf3O08791 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf3O08791 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf3O08791 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf3O08791 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf3O08791 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf3O08791 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ebf3O08791 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf3O08791 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.06□□□□□ -0.48
Ebf3O08791 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.06□□□□□ -0.48
Ebf3O08791 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ebf3O08791 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.06□□□□□ -0.48
Ebf3O08791 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf3O08791 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf3O08791 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ebf3O08791 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms