Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim9Q8C7M3 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim9Q8C7M3 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim9Q8C7M3 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim9Q8C7M3 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim9Q8C7M3 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim9Q8C7M3 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim9Q8C7M3 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trim9Q8C7M3 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Trim9Q8C7M3 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trim9Q8C7M3 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
Trim9Q8C7M3 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim9Q8C7M3 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.77□□□□□ -0.37
Trim9Q8C7M3 Gm12217-201ENSMUST00000118858 696 ntBASIC12.77□□□□□ -0.37
Trim9Q8C7M3 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.77□□□□□ -0.37
Trim9Q8C7M3 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.77□□□□□ -0.37
Trim9Q8C7M3 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.77□□□□□ -0.37
Trim9Q8C7M3 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim9Q8C7M3 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.77□□□□□ -0.37
Trim9Q8C7M3 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Trim9Q8C7M3 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.37
Trim9Q8C7M3 Gm9540-201ENSMUST00000188230 478 ntBASIC12.77□□□□□ -0.37
Trim9Q8C7M3 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.77□□□□□ -0.37
Trim9Q8C7M3 Gm44008-201ENSMUST00000204345 412 ntBASIC12.77□□□□□ -0.37
Trim9Q8C7M3 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Trim9Q8C7M3 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim9Q8C7M3 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim9Q8C7M3 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.77□□□□□ -0.37
Trim9Q8C7M3 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.77□□□□□ -0.37
Trim9Q8C7M3 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.77□□□□□ -0.37
Trim9Q8C7M3 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim9Q8C7M3 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim9Q8C7M3 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.77□□□□□ -0.37
Trim9Q8C7M3 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim9Q8C7M3 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim9Q8C7M3 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim9Q8C7M3 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Trim9Q8C7M3 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim9Q8C7M3 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim9Q8C7M3 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Gm11941-201ENSMUST00000119904 610 ntBASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Gm25732-201ENSMUST00000175168 60 ntBASIC12.76□□□□□ -0.37
Trim9Q8C7M3 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.76□□□□□ -0.37
Trim9Q8C7M3 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Btrc-209ENSMUST00000224478 2194 ntBASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim9Q8C7M3 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim9Q8C7M3 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 107.1 ms