Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup98Q6PFD9 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Nup98Q6PFD9 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup98Q6PFD9 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup98Q6PFD9 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nup98Q6PFD9 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.45□□□□□ -0.26
Nup98Q6PFD9 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.45□□□□□ -0.26
Nup98Q6PFD9 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup98Q6PFD9 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup98Q6PFD9 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup98Q6PFD9 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup98Q6PFD9 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.44□□□□□ -0.26
Nup98Q6PFD9 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Nup98Q6PFD9 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Nup98Q6PFD9 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup98Q6PFD9 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.44□□□□□ -0.26
Nup98Q6PFD9 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Nup98Q6PFD9 Gm13039-201ENSMUST00000118638 794 ntBASIC13.44□□□□□ -0.26
Nup98Q6PFD9 Gm13019-201ENSMUST00000120000 276 ntBASIC13.44□□□□□ -0.26
Nup98Q6PFD9 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC13.44□□□□□ -0.26
Nup98Q6PFD9 Gm22846-201ENSMUST00000157706 270 ntBASIC13.44□□□□□ -0.26
Nup98Q6PFD9 Gm20781-201ENSMUST00000193154 693 ntBASIC13.44□□□□□ -0.26
Nup98Q6PFD9 Gm21736-201ENSMUST00000195399 693 ntBASIC13.44□□□□□ -0.26
Nup98Q6PFD9 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC13.44□□□□□ -0.26
Nup98Q6PFD9 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC13.44□□□□□ -0.26
Nup98Q6PFD9 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup98Q6PFD9 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Nup98Q6PFD9 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.26
Nup98Q6PFD9 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup98Q6PFD9 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nup98Q6PFD9 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Nup98Q6PFD9 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nup98Q6PFD9 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup98Q6PFD9 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Nup98Q6PFD9 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup98Q6PFD9 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup98Q6PFD9 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nup98Q6PFD9 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup98Q6PFD9 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nup98Q6PFD9 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Gm18733-202ENSMUST00000174447 401 ntBASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Snord55-201ENSMUST00000174939 79 ntBASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Gm18204-201ENSMUST00000209835 793 ntBASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Gm18499-201ENSMUST00000220808 1021 ntBASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Gm25569-201ENSMUST00000157175 131 ntBASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Gm17221-201ENSMUST00000163909 481 ntBASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Gm17073-201ENSMUST00000168069 556 ntBASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Gm43564-201ENSMUST00000196185 211 ntBASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Gm31274-201ENSMUST00000197356 229 ntBASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Gm43506-201ENSMUST00000200675 753 ntBASIC13.43□□□□□ -0.26
Nup98Q6PFD9 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 AC162932.1-201ENSMUST00000219209 872 ntBASIC13.43□□□□□ -0.26
Nup98Q6PFD9 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 AC154435.1-201ENSMUST00000223938 959 ntBASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC13.43□□□□□ -0.26
Nup98Q6PFD9 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup98Q6PFD9 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms