Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fam196aQ3USH1 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fam196aQ3USH1 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.72□□□□□ -0.53
Fam196aQ3USH1 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fam196aQ3USH1 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fam196aQ3USH1 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fam196aQ3USH1 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fam196aQ3USH1 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Fam196aQ3USH1 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.72□□□□□ -0.53
Fam196aQ3USH1 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fam196aQ3USH1 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.72□□□□□ -0.53
Fam196aQ3USH1 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Fam196aQ3USH1 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Fam196aQ3USH1 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fam196aQ3USH1 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Fam196aQ3USH1 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fam196aQ3USH1 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fam196aQ3USH1 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.71□□□□□ -0.53
Fam196aQ3USH1 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fam196aQ3USH1 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
Fam196aQ3USH1 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fam196aQ3USH1 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Fam196aQ3USH1 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.71□□□□□ -0.53
Fam196aQ3USH1 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Fam196aQ3USH1 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Fam196aQ3USH1 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Fam196aQ3USH1 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Fam196aQ3USH1 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fam196aQ3USH1 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Fam196aQ3USH1 Gm11475-201ENSMUST00000118482 476 ntBASIC11.71□□□□□ -0.53
Fam196aQ3USH1 Gm15549-201ENSMUST00000121595 622 ntBASIC11.71□□□□□ -0.53
Fam196aQ3USH1 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Fam196aQ3USH1 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Fam196aQ3USH1 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fam196aQ3USH1 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fam196aQ3USH1 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC11.71□□□□□ -0.53
Fam196aQ3USH1 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Fam196aQ3USH1 Gm33707-201ENSMUST00000195135 569 ntBASIC11.71□□□□□ -0.53
Fam196aQ3USH1 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC11.71□□□□□ -0.53
Fam196aQ3USH1 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC11.71□□□□□ -0.53
Fam196aQ3USH1 Gm7525-201ENSMUST00000219425 454 ntBASIC11.71□□□□□ -0.53
Fam196aQ3USH1 AC164556.1-201ENSMUST00000221318 751 ntBASIC11.71□□□□□ -0.53
Fam196aQ3USH1 AC102847.1-202ENSMUST00000226313 1245 ntBASIC11.71□□□□□ -0.53
Fam196aQ3USH1 AC156790.2-201ENSMUST00000227115 568 ntBASIC11.71□□□□□ -0.53
Fam196aQ3USH1 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fam196aQ3USH1 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.71□□□□□ -0.53
Fam196aQ3USH1 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Fam196aQ3USH1 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.71□□□□□ -0.53
Fam196aQ3USH1 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.71□□□□□ -0.54
Fam196aQ3USH1 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Fam196aQ3USH1 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Fam196aQ3USH1 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Fam196aQ3USH1 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Fam196aQ3USH1 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Fam196aQ3USH1 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.71□□□□□ -0.54
Fam196aQ3USH1 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Gm12986-201ENSMUST00000119037 967 ntBASIC11.7□□□□□ -0.54
Fam196aQ3USH1 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Gm13827-201ENSMUST00000148801 372 ntBASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Gm25569-201ENSMUST00000157175 131 ntBASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Mir7051-201ENSMUST00000184167 73 ntBASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Mir8093-201ENSMUST00000185043 137 ntBASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Gm37284-201ENSMUST00000193607 539 ntBASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Fam196aQ3USH1 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms