Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.37□□□□□ -0.43
NrlP54846 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12.37□□□□□ -0.43
NrlP54846 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC12.37□□□□□ -0.43
NrlP54846 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.37□□□□□ -0.43
NrlP54846 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.37□□□□□ -0.43
NrlP54846 Gm3619-201ENSMUST00000219947 775 ntBASIC12.37□□□□□ -0.43
NrlP54846 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NrlP54846 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.37□□□□□ -0.43
NrlP54846 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NrlP54846 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NrlP54846 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NrlP54846 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NrlP54846 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.37□□□□□ -0.43
NrlP54846 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
NrlP54846 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NrlP54846 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NrlP54846 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NrlP54846 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NrlP54846 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
NrlP54846 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NrlP54846 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NrlP54846 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NrlP54846 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NrlP54846 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.37□□□□□ -0.43
NrlP54846 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
NrlP54846 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
NrlP54846 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
NrlP54846 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
NrlP54846 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NrlP54846 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.36□□□□□ -0.43
NrlP54846 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NrlP54846 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NrlP54846 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.36□□□□□ -0.43
NrlP54846 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NrlP54846 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NrlP54846 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NrlP54846 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
NrlP54846 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
NrlP54846 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NrlP54846 Gm13600-201ENSMUST00000117949 744 ntBASIC12.36□□□□□ -0.43
NrlP54846 Gm15615-201ENSMUST00000118876 198 ntBASIC12.36□□□□□ -0.43
NrlP54846 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12.36□□□□□ -0.43
NrlP54846 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12.36□□□□□ -0.43
NrlP54846 Gm26134-201ENSMUST00000178484 110 ntBASIC12.36□□□□□ -0.43
NrlP54846 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.36□□□□□ -0.43
NrlP54846 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NrlP54846 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.36□□□□□ -0.43
NrlP54846 Gm9139-201ENSMUST00000218817 700 ntBASIC12.36□□□□□ -0.43
NrlP54846 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.36□□□□□ -0.43
NrlP54846 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
NrlP54846 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NrlP54846 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NrlP54846 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
NrlP54846 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NrlP54846 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NrlP54846 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NrlP54846 Gm13615-201ENSMUST00000120242 1612 ntBASIC12.36□□□□□ -0.43
NrlP54846 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NrlP54846 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
NrlP54846 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
NrlP54846 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
NrlP54846 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NrlP54846 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
NrlP54846 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.36□□□□□ -0.43
NrlP54846 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
NrlP54846 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NrlP54846 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
NrlP54846 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NrlP54846 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NrlP54846 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
NrlP54846 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NrlP54846 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
NrlP54846 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
NrlP54846 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NrlP54846 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.35□□□□□ -0.43
NrlP54846 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NrlP54846 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
NrlP54846 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NrlP54846 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
NrlP54846 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.35□□□□□ -0.43
NrlP54846 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NrlP54846 Gm11244-201ENSMUST00000121243 237 ntBASIC12.35□□□□□ -0.43
NrlP54846 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.35□□□□□ -0.43
NrlP54846 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NrlP54846 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NrlP54846 Gm9192-201ENSMUST00000183221 985 ntBASIC12.35□□□□□ -0.43
NrlP54846 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NrlP54846 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC12.35□□□□□ -0.43
NrlP54846 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.35□□□□□ -0.43
NrlP54846 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.35□□□□□ -0.43
NrlP54846 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.35□□□□□ -0.43
NrlP54846 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
NrlP54846 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NrlP54846 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
NrlP54846 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NrlP54846 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NrlP54846 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
NrlP54846 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
NrlP54846 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.35□□□□□ -0.43
NrlP54846 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms