Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox2P48432 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.67
Sox2P48432 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox2P48432 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Sox2P48432 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox2P48432 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox2P48432 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox2P48432 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox2P48432 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC10.83□□□□□ -0.68
Sox2P48432 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox2P48432 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Sox2P48432 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox2P48432 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox2P48432 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.83□□□□□ -0.68
Sox2P48432 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox2P48432 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox2P48432 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Sox2P48432 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.83□□□□□ -0.68
Sox2P48432 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox2P48432 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.83□□□□□ -0.68
Sox2P48432 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox2P48432 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.83□□□□□ -0.68
Sox2P48432 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox2P48432 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox2P48432 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox2P48432 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.83□□□□□ -0.68
Sox2P48432 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.83□□□□□ -0.68
Sox2P48432 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.83□□□□□ -0.68
Sox2P48432 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox2P48432 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.83□□□□□ -0.68
Sox2P48432 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.83□□□□□ -0.68
Sox2P48432 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox2P48432 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.83□□□□□ -0.68
Sox2P48432 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox2P48432 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox2P48432 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox2P48432 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.83□□□□□ -0.68
Sox2P48432 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Sox2P48432 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox2P48432 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox2P48432 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox2P48432 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Sox2P48432 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.83□□□□□ -0.68
Sox2P48432 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Sox2P48432 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Sox2P48432 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox2P48432 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox2P48432 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox2P48432 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.83□□□□□ -0.68
Sox2P48432 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox2P48432 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.83□□□□□ -0.68
Sox2P48432 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox2P48432 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.82□□□□□ -0.68
Sox2P48432 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox2P48432 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox2P48432 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox2P48432 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Sox2P48432 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox2P48432 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox2P48432 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox2P48432 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox2P48432 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.82□□□□□ -0.68
Sox2P48432 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.82□□□□□ -0.68
Sox2P48432 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox2P48432 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.82□□□□□ -0.68
Sox2P48432 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox2P48432 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox2P48432 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox2P48432 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox2P48432 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox2P48432 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox2P48432 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox2P48432 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Sox2P48432 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox2P48432 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox2P48432 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Sox2P48432 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.82□□□□□ -0.68
Sox2P48432 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox2P48432 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.82□□□□□ -0.68
Sox2P48432 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Sox2P48432 Gm27514-201ENSMUST00000183692 110 ntBASIC10.82□□□□□ -0.68
Sox2P48432 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Sox2P48432 Gm9230-201ENSMUST00000188228 532 ntBASIC10.82□□□□□ -0.68
Sox2P48432 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Sox2P48432 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.82□□□□□ -0.68
Sox2P48432 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.82□□□□□ -0.68
Sox2P48432 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.82□□□□□ -0.68
Sox2P48432 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox2P48432 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox2P48432 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox2P48432 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox2P48432 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox2P48432 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox2P48432 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.82□□□□□ -0.68
Sox2P48432 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox2P48432 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox2P48432 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Sox2P48432 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox2P48432 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox2P48432 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms