Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC12.29□□□□□ -0.44
Clp1Q99LI9 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clp1Q99LI9 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clp1Q99LI9 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Clp1Q99LI9 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clp1Q99LI9 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clp1Q99LI9 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Clp1Q99LI9 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clp1Q99LI9 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clp1Q99LI9 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clp1Q99LI9 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Clp1Q99LI9 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.29□□□□□ -0.44
Clp1Q99LI9 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.29□□□□□ -0.44
Clp1Q99LI9 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clp1Q99LI9 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clp1Q99LI9 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clp1Q99LI9 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.29□□□□□ -0.44
Clp1Q99LI9 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Clp1Q99LI9 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Gm13019-201ENSMUST00000120000 276 ntBASIC12.28□□□□□ -0.44
Clp1Q99LI9 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Gm12712-201ENSMUST00000120676 801 ntBASIC12.28□□□□□ -0.44
Clp1Q99LI9 Gm11960-201ENSMUST00000122068 925 ntBASIC12.28□□□□□ -0.44
Clp1Q99LI9 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Gm9507-202ENSMUST00000180157 654 ntBASIC12.28□□□□□ -0.44
Clp1Q99LI9 Mir7051-201ENSMUST00000184167 73 ntBASIC12.28□□□□□ -0.44
Clp1Q99LI9 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Gm5870-201ENSMUST00000196461 282 ntBASIC12.28□□□□□ -0.44
Clp1Q99LI9 Gm42779-201ENSMUST00000198807 406 ntBASIC12.28□□□□□ -0.44
Clp1Q99LI9 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC12.28□□□□□ -0.44
Clp1Q99LI9 AC129323.1-201ENSMUST00000216733 470 ntBASIC12.28□□□□□ -0.44
Clp1Q99LI9 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Gm8181-201ENSMUST00000062242 669 ntBASIC12.28□□□□□ -0.44
Clp1Q99LI9 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Gm37057-201ENSMUST00000192624 1916 ntBASIC12.28□□□□□ -0.44
Clp1Q99LI9 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.28□□□□□ -0.44
Clp1Q99LI9 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Clp1Q99LI9 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clp1Q99LI9 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clp1Q99LI9 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clp1Q99LI9 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.27□□□□□ -0.44
Clp1Q99LI9 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clp1Q99LI9 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clp1Q99LI9 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clp1Q99LI9 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clp1Q99LI9 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clp1Q99LI9 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clp1Q99LI9 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clp1Q99LI9 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clp1Q99LI9 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.27□□□□□ -0.44
Clp1Q99LI9 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Clp1Q99LI9 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clp1Q99LI9 Mir453-201ENSMUST00000104732 82 ntBASIC12.27□□□□□ -0.45
Clp1Q99LI9 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Clp1Q99LI9 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC12.27□□□□□ -0.45
Clp1Q99LI9 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC12.27□□□□□ -0.45
Clp1Q99LI9 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Clp1Q99LI9 Gm25830-201ENSMUST00000158923 132 ntBASIC12.27□□□□□ -0.45
Clp1Q99LI9 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC12.27□□□□□ -0.45
Clp1Q99LI9 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Clp1Q99LI9 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Clp1Q99LI9 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.27□□□□□ -0.45
Clp1Q99LI9 Gm25025-201ENSMUST00000175018 111 ntBASIC12.27□□□□□ -0.45
Clp1Q99LI9 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Clp1Q99LI9 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Clp1Q99LI9 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC12.27□□□□□ -0.45
Clp1Q99LI9 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clp1Q99LI9 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Clp1Q99LI9 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clp1Q99LI9 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clp1Q99LI9 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clp1Q99LI9 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms