Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm10463-202ENSMUST00000195772 2889 ntBASIC9.45□□□□□ -0.9
Cdx1P18111 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cdx1P18111 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
Cdx1P18111 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Cdx1P18111 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Cdx1P18111 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Cdx1P18111 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx1P18111 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx1P18111 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx1P18111 Foxm1-202ENSMUST00000112148 2229 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Cdx1P18111 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx1P18111 AC154352.1-201ENSMUST00000221477 2365 ntBASIC9.44□□□□□ -0.9
Cdx1P18111 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx1P18111 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Cdx1P18111 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC9.44□□□□□ -0.9
Cdx1P18111 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Cdx1P18111 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx1P18111 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx1P18111 Gm24255-201ENSMUST00000104481 128 ntBASIC9.44□□□□□ -0.9
Cdx1P18111 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC9.44□□□□□ -0.9
Cdx1P18111 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC9.44□□□□□ -0.9
Cdx1P18111 Gm15808-201ENSMUST00000119046 604 ntBASIC9.44□□□□□ -0.9
Cdx1P18111 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx1P18111 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx1P18111 Gm25668-201ENSMUST00000157700 129 ntBASIC9.44□□□□□ -0.9
Cdx1P18111 Gm2991-201ENSMUST00000173338 480 ntBASIC9.44□□□□□ -0.9
Cdx1P18111 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC9.44□□□□□ -0.9
Cdx1P18111 Gm37259-201ENSMUST00000193903 849 ntBASIC9.44□□□□□ -0.9
Cdx1P18111 Gm7118-201ENSMUST00000200167 1003 ntBASIC9.44□□□□□ -0.9
Cdx1P18111 Gm18584-201ENSMUST00000203098 964 ntBASIC9.44□□□□□ -0.9
Cdx1P18111 AC098716.1-201ENSMUST00000213527 703 ntBASIC9.44□□□□□ -0.9
Cdx1P18111 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC9.44□□□□□ -0.9
Cdx1P18111 Gm5781-201ENSMUST00000219792 443 ntBASIC9.44□□□□□ -0.9
Cdx1P18111 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC9.44□□□□□ -0.9
Cdx1P18111 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx1P18111 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Cdx1P18111 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx1P18111 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx1P18111 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Cdx1P18111 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx1P18111 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Cdx1P18111 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx1P18111 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Cdx1P18111 Gm8036-201ENSMUST00000118089 1718 ntBASIC9.44□□□□□ -0.9
Cdx1P18111 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx1P18111 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx1P18111 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Cdx1P18111 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx1P18111 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Cdx1P18111 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx1P18111 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx1P18111 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx1P18111 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC9.44□□□□□ -0.9
Cdx1P18111 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx1P18111 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC9.44□□□□□ -0.9
Cdx1P18111 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cdx1P18111 Spata33-207ENSMUST00000212760 4074 ntBASIC9.44□□□□□ -0.9
Cdx1P18111 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Cdx1P18111 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC9.43□□□□□ -0.9
Cdx1P18111 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Cdx1P18111 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Cdx1P18111 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Cdx1P18111 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Cdx1P18111 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cdx1P18111 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Cdx1P18111 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC9.43□□□□□ -0.9
Cdx1P18111 Gm22323-201ENSMUST00000103832 109 ntBASIC9.43□□□□□ -0.9
Cdx1P18111 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Cdx1P18111 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Cdx1P18111 Gm11222-201ENSMUST00000119005 738 ntBASIC9.43□□□□□ -0.9
Cdx1P18111 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC9.43□□□□□ -0.9
Cdx1P18111 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC9.43□□□□□ -0.9
Cdx1P18111 Gm7809-201ENSMUST00000153199 742 ntBASIC9.43□□□□□ -0.9
Cdx1P18111 Gm24548-201ENSMUST00000158650 108 ntBASIC9.43□□□□□ -0.9
Cdx1P18111 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC9.43□□□□□ -0.9
Cdx1P18111 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Cdx1P18111 Gm20482-202ENSMUST00000174729 825 ntBASIC9.43□□□□□ -0.9
Cdx1P18111 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC9.43□□□□□ -0.9
Cdx1P18111 Gm7895-201ENSMUST00000187459 1173 ntBASIC9.43□□□□□ -0.9
Cdx1P18111 Gm6621-201ENSMUST00000193251 772 ntBASIC9.43□□□□□ -0.9
Cdx1P18111 Gm38158-201ENSMUST00000194617 339 ntBASIC9.43□□□□□ -0.9
Cdx1P18111 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC9.43□□□□□ -0.9
Cdx1P18111 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC9.43□□□□□ -0.9
Cdx1P18111 Gm9176-201ENSMUST00000219955 1120 ntBASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms