Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hcn1O88704 Gm7003-201ENSMUST00000195089 312 ntBASIC11.17□□□□□ -0.62
Hcn1O88704 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.17□□□□□ -0.62
Hcn1O88704 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Hcn1O88704 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.17□□□□□ -0.62
Hcn1O88704 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.17□□□□□ -0.62
Hcn1O88704 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hcn1O88704 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hcn1O88704 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hcn1O88704 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hcn1O88704 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hcn1O88704 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hcn1O88704 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hcn1O88704 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Hcn1O88704 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hcn1O88704 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hcn1O88704 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hcn1O88704 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hcn1O88704 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hcn1O88704 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hcn1O88704 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hcn1O88704 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hcn1O88704 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hcn1O88704 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Hcn1O88704 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hcn1O88704 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hcn1O88704 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hcn1O88704 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hcn1O88704 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.16□□□□□ -0.62
Hcn1O88704 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Hcn1O88704 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hcn1O88704 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.16□□□□□ -0.62
Hcn1O88704 Gm14247-201ENSMUST00000120950 237 ntBASIC11.16□□□□□ -0.62
Hcn1O88704 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.16□□□□□ -0.62
Hcn1O88704 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Hcn1O88704 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Hcn1O88704 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.16□□□□□ -0.62
Hcn1O88704 Gm16505-201ENSMUST00000179981 232 ntBASIC11.16□□□□□ -0.62
Hcn1O88704 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.16□□□□□ -0.62
Hcn1O88704 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.16□□□□□ -0.62
Hcn1O88704 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hcn1O88704 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hcn1O88704 Gm5455-201ENSMUST00000058710 715 ntBASIC11.16□□□□□ -0.62
Hcn1O88704 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Hcn1O88704 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.16□□□□□ -0.62
Hcn1O88704 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.16□□□□□ -0.62
Hcn1O88704 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hcn1O88704 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hcn1O88704 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Hcn1O88704 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hcn1O88704 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Hcn1O88704 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hcn1O88704 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hcn1O88704 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hcn1O88704 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hcn1O88704 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hcn1O88704 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hcn1O88704 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hcn1O88704 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hcn1O88704 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hcn1O88704 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hcn1O88704 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.15□□□□□ -0.62
Hcn1O88704 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hcn1O88704 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hcn1O88704 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hcn1O88704 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.15□□□□□ -0.62
Hcn1O88704 Gm22133-201ENSMUST00000102082 109 ntBASIC11.15□□□□□ -0.62
Hcn1O88704 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.15□□□□□ -0.62
Hcn1O88704 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hcn1O88704 Gm37466-201ENSMUST00000195692 652 ntBASIC11.15□□□□□ -0.62
Hcn1O88704 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hcn1O88704 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hcn1O88704 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hcn1O88704 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Hcn1O88704 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hcn1O88704 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hcn1O88704 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Hcn1O88704 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hcn1O88704 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hcn1O88704 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hcn1O88704 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Hcn1O88704 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.15□□□□□ -0.62
Hcn1O88704 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hcn1O88704 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hcn1O88704 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Hcn1O88704 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hcn1O88704 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.15□□□□□ -0.62
Hcn1O88704 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Hcn1O88704 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Hcn1O88704 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Hcn1O88704 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Hcn1O88704 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Hcn1O88704 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hcn1O88704 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Hcn1O88704 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hcn1O88704 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.14□□□□□ -0.63
Hcn1O88704 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Hcn1O88704 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Hcn1O88704 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Hcn1O88704 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms