Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm2P58774 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC13.39□□□□□ -0.27
Tpm2P58774 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm2P58774 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm2P58774 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm2P58774 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Tpm2P58774 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tpm2P58774 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm2P58774 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm2P58774 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm2P58774 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Tpm2P58774 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm2P58774 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm2P58774 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC13.38□□□□□ -0.27
Tpm2P58774 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Tpm2P58774 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm2P58774 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm2P58774 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.38□□□□□ -0.27
Tpm2P58774 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Tpm2P58774 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm2P58774 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm2P58774 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm2P58774 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm2P58774 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm2P58774 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.38□□□□□ -0.27
Tpm2P58774 Gm12036-201ENSMUST00000120008 530 ntBASIC13.38□□□□□ -0.27
Tpm2P58774 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Tpm2P58774 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.38□□□□□ -0.27
Tpm2P58774 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm2P58774 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Tpm2P58774 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Tpm2P58774 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.38□□□□□ -0.27
Tpm2P58774 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm2P58774 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Tpm2P58774 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Tpm2P58774 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Tpm2P58774 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm2P58774 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm2P58774 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm2P58774 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm2P58774 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Tpm2P58774 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm2P58774 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm2P58774 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm2P58774 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm2P58774 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm2P58774 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm2P58774 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Tpm2P58774 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Tpm2P58774 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tpm2P58774 Gm11298-201ENSMUST00000120503 1799 ntBASIC13.37□□□□□ -0.27
Tpm2P58774 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Tpm2P58774 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm2P58774 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm2P58774 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm2P58774 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm2P58774 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm2P58774 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm2P58774 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm2P58774 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm2P58774 Gm42427-201ENSMUST00000200473 5292 ntBASIC13.37□□□□□ -0.27
Tpm2P58774 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm2P58774 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm2P58774 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm2P58774 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Tpm2P58774 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm2P58774 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm2P58774 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Tpm2P58774 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Tpm2P58774 Gm24548-201ENSMUST00000158650 108 ntBASIC13.37□□□□□ -0.27
Tpm2P58774 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.37□□□□□ -0.27
Tpm2P58774 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm2P58774 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.37□□□□□ -0.27
Tpm2P58774 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.37□□□□□ -0.27
Tpm2P58774 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm2P58774 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm2P58774 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm2P58774 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm2P58774 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm2P58774 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm2P58774 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm2P58774 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Tpm2P58774 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.37□□□□□ -0.27
Tpm2P58774 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm2P58774 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm2P58774 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Tpm2P58774 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Tpm2P58774 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm2P58774 Gm21039-201ENSMUST00000223359 2012 ntBASIC13.37□□□□□ -0.27
Tpm2P58774 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm2P58774 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm2P58774 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm2P58774 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm2P58774 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm2P58774 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tpm2P58774 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm2P58774 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tpm2P58774 Gm19040-201ENSMUST00000203280 4726 ntBASIC13.36□□□□□ -0.27
Tpm2P58774 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Tpm2P58774 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms