Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Rprl1-202ENSMUST00000198476 238 ntBASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Gm19187-201ENSMUST00000206781 892 ntBASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Gm45186-201ENSMUST00000206874 478 ntBASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trerf1Q8BXJ2 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Gm23912-201ENSMUST00000104687 87 ntBASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Gm12997-201ENSMUST00000120207 640 ntBASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Gm9230-201ENSMUST00000188228 532 ntBASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Gm45224-201ENSMUST00000208203 414 ntBASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trerf1Q8BXJ2 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trerf1Q8BXJ2 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trerf1Q8BXJ2 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trerf1Q8BXJ2 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trerf1Q8BXJ2 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trerf1Q8BXJ2 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trerf1Q8BXJ2 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Trerf1Q8BXJ2 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trerf1Q8BXJ2 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trerf1Q8BXJ2 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trerf1Q8BXJ2 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trerf1Q8BXJ2 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.39□□□□□ -0.43
Trerf1Q8BXJ2 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trerf1Q8BXJ2 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trerf1Q8BXJ2 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trerf1Q8BXJ2 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC12.39□□□□□ -0.43
Trerf1Q8BXJ2 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trerf1Q8BXJ2 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms