Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Gm6024-201ENSMUST00000117850 1558 ntBASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 AC158636.1-201ENSMUST00000220118 1393 ntBASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Ttc28Q80XJ3 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Ttc28Q80XJ3 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Ttc28Q80XJ3 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Ttc28Q80XJ3 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Ttc28Q80XJ3 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC9.77□□□□□ -0.84
Ttc28Q80XJ3 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC9.77□□□□□ -0.84
Ttc28Q80XJ3 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.84
Ttc28Q80XJ3 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Ttc28Q80XJ3 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC9.77□□□□□ -0.84
Ttc28Q80XJ3 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Ttc28Q80XJ3 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
Ttc28Q80XJ3 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Ttc28Q80XJ3 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Ttc28Q80XJ3 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Gm23604-201ENSMUST00000104311 132 ntBASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Gm12247-201ENSMUST00000117585 670 ntBASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Gm6331-201ENSMUST00000217890 450 ntBASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 AC154759.1-201ENSMUST00000224137 1159 ntBASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Gm44190-201ENSMUST00000205083 1401 ntBASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Gm24279-201ENSMUST00000104236 131 ntBASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Gm12470-201ENSMUST00000117239 1049 ntBASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Gm11996-201ENSMUST00000117538 915 ntBASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Gm11957-201ENSMUST00000118304 779 ntBASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Gm4982-201ENSMUST00000160440 1098 ntBASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Mir7051-201ENSMUST00000184167 73 ntBASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ttc28Q80XJ3 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms