Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.94□□□□□ -0.66
Six5P70178 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Six5P70178 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Six5P70178 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.94□□□□□ -0.66
Six5P70178 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.94□□□□□ -0.66
Six5P70178 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Six5P70178 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Six5P70178 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Six5P70178 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Six5P70178 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Six5P70178 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Six5P70178 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Six5P70178 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Six5P70178 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Six5P70178 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Six5P70178 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC10.93□□□□□ -0.66
Six5P70178 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Six5P70178 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Six5P70178 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Six5P70178 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Six5P70178 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Six5P70178 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.93□□□□□ -0.66
Six5P70178 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.93□□□□□ -0.66
Six5P70178 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Six5P70178 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Six5P70178 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Six5P70178 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Six5P70178 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Six5P70178 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Six5P70178 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Six5P70178 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Six5P70178 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.93□□□□□ -0.66
Six5P70178 Gm24891-201ENSMUST00000104391 136 ntBASIC10.93□□□□□ -0.66
Six5P70178 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.93□□□□□ -0.66
Six5P70178 Gm12997-201ENSMUST00000120207 640 ntBASIC10.93□□□□□ -0.66
Six5P70178 Gm13263-201ENSMUST00000121271 838 ntBASIC10.93□□□□□ -0.66
Six5P70178 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Six5P70178 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.93□□□□□ -0.66
Six5P70178 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC10.93□□□□□ -0.66
Six5P70178 Gm18734-201ENSMUST00000172937 808 ntBASIC10.93□□□□□ -0.66
Six5P70178 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Six5P70178 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Six5P70178 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Six5P70178 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.93□□□□□ -0.66
Six5P70178 Gm27341-201ENSMUST00000183570 106 ntBASIC10.93□□□□□ -0.66
Six5P70178 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Six5P70178 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Six5P70178 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.93□□□□□ -0.66
Six5P70178 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC10.93□□□□□ -0.66
Six5P70178 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Six5P70178 Gm10288-201ENSMUST00000084614 537 ntBASIC10.93□□□□□ -0.66
Six5P70178 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Six5P70178 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Six5P70178 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Six5P70178 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Six5P70178 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Six5P70178 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Six5P70178 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.93□□□□□ -0.66
Six5P70178 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Six5P70178 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Six5P70178 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Six5P70178 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Six5P70178 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Six5P70178 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Six5P70178 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Six5P70178 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Six5P70178 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Six5P70178 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Six5P70178 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Six5P70178 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Six5P70178 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Six5P70178 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Six5P70178 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Six5P70178 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Six5P70178 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Six5P70178 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Six5P70178 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.92□□□□□ -0.66
Six5P70178 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.92□□□□□ -0.66
Six5P70178 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.92□□□□□ -0.66
Six5P70178 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Six5P70178 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Six5P70178 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.92□□□□□ -0.66
Six5P70178 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Six5P70178 Gm11500-201ENSMUST00000118237 601 ntBASIC10.92□□□□□ -0.66
Six5P70178 Gm11783-201ENSMUST00000119549 885 ntBASIC10.92□□□□□ -0.66
Six5P70178 Gm11941-201ENSMUST00000119904 610 ntBASIC10.92□□□□□ -0.66
Six5P70178 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.92□□□□□ -0.66
Six5P70178 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Six5P70178 Gm10807-201ENSMUST00000177134 795 ntBASIC10.92□□□□□ -0.66
Six5P70178 Gm27552-201ENSMUST00000183351 62 ntBASIC10.92□□□□□ -0.66
Six5P70178 Gm27844-201ENSMUST00000183613 62 ntBASIC10.92□□□□□ -0.66
Six5P70178 Gm43002-201ENSMUST00000200310 155 ntBASIC10.92□□□□□ -0.66
Six5P70178 Gm18056-201ENSMUST00000207670 568 ntBASIC10.92□□□□□ -0.66
Six5P70178 Gm18061-201ENSMUST00000208350 562 ntBASIC10.92□□□□□ -0.66
Six5P70178 Gm6108-201ENSMUST00000208365 367 ntBASIC10.92□□□□□ -0.66
Six5P70178 Gm18063-201ENSMUST00000208529 568 ntBASIC10.92□□□□□ -0.66
Six5P70178 Gm18052-201ENSMUST00000208750 559 ntBASIC10.92□□□□□ -0.66
Six5P70178 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC10.92□□□□□ -0.66
Six5P70178 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.92□□□□□ -0.66
Six5P70178 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms