Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
VPS13CQ709C8 NQO2-204ENST00000380454 851 ntTSL 2 BASIC11.96□□□□□ -0.49
VPS13CQ709C8 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13CQ709C8 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC11.96□□□□□ -0.49
VPS13CQ709C8 KLF17P1-201ENST00000547105 1126 ntBASIC11.96□□□□□ -0.49
VPS13CQ709C8 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13CQ709C8 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC11.96□□□□□ -0.49
VPS13CQ709C8 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC11.96□□□□□ -0.49
VPS13CQ709C8 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC11.96□□□□□ -0.49
VPS13CQ709C8 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC11.96□□□□□ -0.49
VPS13CQ709C8 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC11.96□□□□□ -0.49
VPS13CQ709C8 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC11.96□□□□□ -0.49
VPS13CQ709C8 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC11.96□□□□□ -0.49
VPS13CQ709C8 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13CQ709C8 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC11.96□□□□□ -0.49
VPS13CQ709C8 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC11.96□□□□□ -0.49
VPS13CQ709C8 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13CQ709C8 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13CQ709C8 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
VPS13CQ709C8 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13CQ709C8 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC11.96□□□□□ -0.49
VPS13CQ709C8 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13CQ709C8 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13CQ709C8 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13CQ709C8 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13CQ709C8 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC11.96□□□□□ -0.49
VPS13CQ709C8 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
VPS13CQ709C8 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13CQ709C8 OR52M2P-201ENST00000414298 959 ntBASIC11.96□□□□□ -0.49
VPS13CQ709C8 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13CQ709C8 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC11.96□□□□□ -0.49
VPS13CQ709C8 OR2A1-AS1-210ENST00000496968 531 ntBASIC11.96□□□□□ -0.49
VPS13CQ709C8 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VPS13CQ709C8 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
VPS13CQ709C8 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
VPS13CQ709C8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
VPS13CQ709C8 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
VPS13CQ709C8 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
VPS13CQ709C8 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC11.96□□□□□ -0.5
VPS13CQ709C8 AC073869.1-201ENST00000415574 2762 ntBASIC11.96□□□□□ -0.5
VPS13CQ709C8 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC11.96□□□□□ -0.5
VPS13CQ709C8 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
VPS13CQ709C8 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
VPS13CQ709C8 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
VPS13CQ709C8 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
VPS13CQ709C8 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
VPS13CQ709C8 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
VPS13CQ709C8 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
VPS13CQ709C8 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.5
VPS13CQ709C8 PPP1R2P4-201ENST00000424051 595 ntBASIC11.96□□□□□ -0.5
VPS13CQ709C8 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC11.96□□□□□ -0.5
VPS13CQ709C8 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
VPS13CQ709C8 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC11.96□□□□□ -0.5
VPS13CQ709C8 ST5-261ENST00000626808 1071 ntTSL 5 BASIC11.96□□□□□ -0.5
VPS13CQ709C8 AC139713.2-207ENST00000641556 1292 ntBASIC11.96□□□□□ -0.5
VPS13CQ709C8 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
VPS13CQ709C8 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC11.96□□□□□ -0.5
VPS13CQ709C8 AC138761.6-201ENST00000583997 1423 ntBASIC11.95□□□□□ -0.5
VPS13CQ709C8 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
VPS13CQ709C8 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13CQ709C8 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13CQ709C8 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
VPS13CQ709C8 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13CQ709C8 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13CQ709C8 AP001267.2-201ENST00000532619 2086 ntBASIC11.95□□□□□ -0.5
VPS13CQ709C8 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13CQ709C8 AL365181.3-201ENST00000605886 3222 ntBASIC11.95□□□□□ -0.5
VPS13CQ709C8 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
VPS13CQ709C8 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
VPS13CQ709C8 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13CQ709C8 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC11.95□□□□□ -0.5
VPS13CQ709C8 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13CQ709C8 SCARNA12-201ENST00000459155 270 ntBASIC11.95□□□□□ -0.5
VPS13CQ709C8 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC11.95□□□□□ -0.5
VPS13CQ709C8 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC11.95□□□□□ -0.5
VPS13CQ709C8 AC010632.2-201ENST00000588369 1224 ntBASIC11.95□□□□□ -0.5
VPS13CQ709C8 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC11.95□□□□□ -0.5
VPS13CQ709C8 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13CQ709C8 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13CQ709C8 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13CQ709C8 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC11.95□□□□□ -0.5
VPS13CQ709C8 PXK-210ENST00000479241 2817 ntTSL 2 BASIC11.95□□□□□ -0.5
VPS13CQ709C8 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13CQ709C8 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13CQ709C8 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13CQ709C8 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13CQ709C8 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13CQ709C8 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
VPS13CQ709C8 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC11.95□□□□□ -0.5
VPS13CQ709C8 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
VPS13CQ709C8 AC020658.6-201ENST00000623564 1870 ntBASIC11.95□□□□□ -0.5
VPS13CQ709C8 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
VPS13CQ709C8 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
VPS13CQ709C8 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC11.95□□□□□ -0.5
VPS13CQ709C8 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC11.95□□□□□ -0.5
VPS13CQ709C8 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC11.95□□□□□ -0.5
VPS13CQ709C8 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC11.95□□□□□ -0.5
VPS13CQ709C8 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC11.95□□□□□ -0.5
VPS13CQ709C8 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC11.95□□□□□ -0.5
VPS13CQ709C8 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms