Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ddx55Q6ZPL9 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx55Q6ZPL9 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ddx55Q6ZPL9 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC13.28□□□□□ -0.28
Ddx55Q6ZPL9 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ddx55Q6ZPL9 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.28□□□□□ -0.28
Ddx55Q6ZPL9 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx55Q6ZPL9 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.27□□□□□ -0.28
Ddx55Q6ZPL9 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Ddx55Q6ZPL9 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC13.27□□□□□ -0.28
Ddx55Q6ZPL9 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
Ddx55Q6ZPL9 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Ddx55Q6ZPL9 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ddx55Q6ZPL9 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ddx55Q6ZPL9 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ddx55Q6ZPL9 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ddx55Q6ZPL9 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ddx55Q6ZPL9 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ddx55Q6ZPL9 Mir453-201ENSMUST00000104732 82 ntBASIC13.27□□□□□ -0.29
Ddx55Q6ZPL9 Gm15620-201ENSMUST00000122949 270 ntBASIC13.27□□□□□ -0.29
Ddx55Q6ZPL9 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC13.27□□□□□ -0.29
Ddx55Q6ZPL9 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx55Q6ZPL9 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC13.27□□□□□ -0.29
Ddx55Q6ZPL9 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC13.27□□□□□ -0.29
Ddx55Q6ZPL9 Gm18801-201ENSMUST00000186616 536 ntBASIC13.27□□□□□ -0.29
Ddx55Q6ZPL9 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC13.27□□□□□ -0.29
Ddx55Q6ZPL9 Gm9916-201ENSMUST00000192943 1228 ntBASIC13.27□□□□□ -0.29
Ddx55Q6ZPL9 Gm37852-201ENSMUST00000193027 350 ntBASIC13.27□□□□□ -0.29
Ddx55Q6ZPL9 Gm37365-201ENSMUST00000193109 409 ntBASIC13.27□□□□□ -0.29
Ddx55Q6ZPL9 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Ddx55Q6ZPL9 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx55Q6ZPL9 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC13.27□□□□□ -0.29
Ddx55Q6ZPL9 Gm18210-201ENSMUST00000209001 1524 ntBASIC13.27□□□□□ -0.29
Ddx55Q6ZPL9 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx55Q6ZPL9 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx55Q6ZPL9 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ddx55Q6ZPL9 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx55Q6ZPL9 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx55Q6ZPL9 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx55Q6ZPL9 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.27□□□□□ -0.29
Ddx55Q6ZPL9 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx55Q6ZPL9 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx55Q6ZPL9 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx55Q6ZPL9 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx55Q6ZPL9 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx55Q6ZPL9 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx55Q6ZPL9 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 Gm14234-201ENSMUST00000119539 845 ntBASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 Gm38314-201ENSMUST00000195709 625 ntBASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 Gm43610-201ENSMUST00000199117 365 ntBASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 Gm44190-201ENSMUST00000205083 1401 ntBASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 BC106175-202ENSMUST00000219344 1213 ntBASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 Gm19680-201ENSMUST00000095050 1513 ntBASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx55Q6ZPL9 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx55Q6ZPL9 Gm8111-201ENSMUST00000117659 987 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms