Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Gm38140-201ENSMUST00000193617 2755 ntBASIC9.47□□□□□ -0.89
P06323 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P06323 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P06323 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
P06323 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
P06323 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P06323 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
P06323 Gm9200-201ENSMUST00000118513 1354 ntBASIC9.47□□□□□ -0.89
P06323 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P06323 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
P06323 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
P06323 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P06323 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.89
P06323 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
P06323 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
P06323 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
P06323 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
P06323 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC9.46□□□□□ -0.89
P06323 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.89
P06323 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
P06323 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC9.46□□□□□ -0.89
P06323 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
P06323 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
P06323 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC9.46□□□□□ -0.89
P06323 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
P06323 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
P06323 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
P06323 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
P06323 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
P06323 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
P06323 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
P06323 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC9.46□□□□□ -0.9
P06323 Gm12201-201ENSMUST00000120657 1234 ntBASIC9.46□□□□□ -0.9
P06323 Gm12164-201ENSMUST00000121695 551 ntBASIC9.46□□□□□ -0.9
P06323 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC9.46□□□□□ -0.9
P06323 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
P06323 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
P06323 AY702102-202ENSMUST00000194651 1173 ntBASIC9.46□□□□□ -0.9
P06323 Gm31256-201ENSMUST00000194705 506 ntBASIC9.46□□□□□ -0.9
P06323 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC9.46□□□□□ -0.9
P06323 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.9
P06323 Gm18054-201ENSMUST00000207539 555 ntBASIC9.46□□□□□ -0.9
P06323 Gm8712-201ENSMUST00000221090 701 ntBASIC9.46□□□□□ -0.9
P06323 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
P06323 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
P06323 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
P06323 Gm25857-201ENSMUST00000082788 129 ntBASIC9.46□□□□□ -0.9
P06323 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
P06323 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC9.46□□□□□ -0.9
P06323 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
P06323 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
P06323 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
P06323 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
P06323 AC129931.1-201ENSMUST00000228865 1861 ntBASIC9.46□□□□□ -0.9
P06323 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
P06323 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
P06323 AC131068.2-201ENSMUST00000226175 1453 ntBASIC9.46□□□□□ -0.9
P06323 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
P06323 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
P06323 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
P06323 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
P06323 Gm43773-201ENSMUST00000198548 2162 ntBASIC9.46□□□□□ -0.9
P06323 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
P06323 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P06323 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P06323 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P06323 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
P06323 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P06323 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
P06323 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P06323 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P06323 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P06323 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P06323 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P06323 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P06323 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
P06323 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC9.45□□□□□ -0.9
P06323 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
P06323 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
P06323 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
P06323 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
P06323 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
P06323 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
P06323 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC9.45□□□□□ -0.9
P06323 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
P06323 Gm14644-201ENSMUST00000116671 647 ntBASIC9.45□□□□□ -0.9
P06323 Gm12241-201ENSMUST00000118330 726 ntBASIC9.45□□□□□ -0.9
P06323 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC9.45□□□□□ -0.9
P06323 Gm11700-201ENSMUST00000119409 403 ntBASIC9.45□□□□□ -0.9
P06323 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P06323 Gm14441-201ENSMUST00000121960 540 ntBASIC9.45□□□□□ -0.9
P06323 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC9.45□□□□□ -0.9
P06323 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
P06323 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC9.45□□□□□ -0.9
P06323 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC9.45□□□□□ -0.9
P06323 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
P06323 Gm6114-201ENSMUST00000182472 968 ntBASIC9.45□□□□□ -0.9
P06323 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC9.45□□□□□ -0.9
P06323 Gm18893-201ENSMUST00000198416 943 ntBASIC9.45□□□□□ -0.9
P06323 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms