Protein–RNA interactions for Protein: O54798

Brs3, Bombesin receptor subtype-3, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brs3O54798 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC9.72□□□□□ -0.85
Brs3O54798 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Brs3O54798 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Brs3O54798 Gm14058-201ENSMUST00000116082 735 ntBASIC9.72□□□□□ -0.85
Brs3O54798 Gm13035-201ENSMUST00000117496 342 ntBASIC9.72□□□□□ -0.85
Brs3O54798 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC9.72□□□□□ -0.85
Brs3O54798 Gm14724-201ENSMUST00000118400 537 ntBASIC9.72□□□□□ -0.85
Brs3O54798 B9d1os-201ENSMUST00000137010 674 ntBASIC9.72□□□□□ -0.85
Brs3O54798 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC9.72□□□□□ -0.85
Brs3O54798 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC9.72□□□□□ -0.85
Brs3O54798 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Brs3O54798 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC9.72□□□□□ -0.85
Brs3O54798 Gm8100-201ENSMUST00000182906 988 ntBASIC9.72□□□□□ -0.85
Brs3O54798 Gm4482-201ENSMUST00000200876 742 ntBASIC9.72□□□□□ -0.85
Brs3O54798 Gm19287-201ENSMUST00000203190 358 ntBASIC9.72□□□□□ -0.85
Brs3O54798 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC9.72□□□□□ -0.85
Brs3O54798 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Brs3O54798 Gm21027-201ENSMUST00000219300 1236 ntBASIC9.72□□□□□ -0.85
Brs3O54798 Spcs1-203ENSMUST00000226374 592 ntBASIC9.72□□□□□ -0.85
Brs3O54798 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Brs3O54798 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Brs3O54798 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Brs3O54798 Gm10288-201ENSMUST00000084614 537 ntBASIC9.72□□□□□ -0.85
Brs3O54798 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Brs3O54798 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Brs3O54798 AC173482.6-201ENSMUST00000225889 1741 ntBASIC9.72□□□□□ -0.85
Brs3O54798 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Brs3O54798 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Brs3O54798 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Brs3O54798 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Brs3O54798 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC9.72□□□□□ -0.85
Brs3O54798 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Brs3O54798 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Brs3O54798 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Brs3O54798 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Brs3O54798 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Brs3O54798 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Brs3O54798 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Brs3O54798 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Brs3O54798 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Brs3O54798 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Brs3O54798 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Brs3O54798 Gm37437-201ENSMUST00000194451 1937 ntBASIC9.72□□□□□ -0.85
Brs3O54798 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Brs3O54798 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Brs3O54798 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Brs3O54798 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Brs3O54798 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Brs3O54798 Gm43447-201ENSMUST00000198471 1535 ntBASIC9.72□□□□□ -0.85
Brs3O54798 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Brs3O54798 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Brs3O54798 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Brs3O54798 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Brs3O54798 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Brs3O54798 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Brs3O54798 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
Brs3O54798 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC9.71□□□□□ -0.85
Brs3O54798 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Brs3O54798 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Brs3O54798 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Brs3O54798 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Brs3O54798 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Brs3O54798 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Brs3O54798 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Brs3O54798 Gm11663-201ENSMUST00000117888 290 ntBASIC9.71□□□□□ -0.86
Brs3O54798 Gm11331-201ENSMUST00000119764 288 ntBASIC9.71□□□□□ -0.86
Brs3O54798 Gm12164-201ENSMUST00000121695 551 ntBASIC9.71□□□□□ -0.86
Brs3O54798 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC9.71□□□□□ -0.86
Brs3O54798 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Brs3O54798 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC9.71□□□□□ -0.86
Brs3O54798 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Brs3O54798 Ighv1-48-201ENSMUST00000191795 294 ntBASIC9.71□□□□□ -0.86
Brs3O54798 Gm42997-202ENSMUST00000200321 985 ntBASIC9.71□□□□□ -0.86
Brs3O54798 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Brs3O54798 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC9.71□□□□□ -0.86
Brs3O54798 AC131330.1-201ENSMUST00000227814 1015 ntBASIC9.71□□□□□ -0.86
Brs3O54798 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Brs3O54798 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Brs3O54798 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Brs3O54798 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Brs3O54798 Gm13812-201ENSMUST00000118061 1347 ntBASIC9.71□□□□□ -0.86
Brs3O54798 Gm13810-201ENSMUST00000118584 1347 ntBASIC9.71□□□□□ -0.86
Brs3O54798 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Brs3O54798 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Brs3O54798 Gm6580-201ENSMUST00000117504 1357 ntBASIC9.71□□□□□ -0.86
Brs3O54798 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Brs3O54798 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Brs3O54798 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Brs3O54798 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Brs3O54798 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Brs3O54798 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Brs3O54798 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Brs3O54798 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC9.71□□□□□ -0.86
Brs3O54798 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Brs3O54798 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Brs3O54798 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Brs3O54798 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Brs3O54798 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Brs3O54798 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Brs3O54798 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 134.1 ms