Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Gm2594-201ENSMUST00000214774 742 ntBASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 AC105408.1-201ENSMUST00000227771 802 ntBASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Smok4a-201ENSMUST00000074512 1455 ntBASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx2-4Q9EQM3 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Gm5780-201ENSMUST00000217774 1834 ntBASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Gm25562-201ENSMUST00000104608 133 ntBASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Gm16459-201ENSMUST00000121443 686 ntBASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Gm26272-201ENSMUST00000179241 132 ntBASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Gm37197-201ENSMUST00000195607 401 ntBASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Gm5982-201ENSMUST00000196234 512 ntBASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Gm45094-201ENSMUST00000207013 617 ntBASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Gm2448-201ENSMUST00000207080 559 ntBASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Gm9487-201ENSMUST00000216600 472 ntBASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx2-4Q9EQM3 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-4Q9EQM3 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.99□□□□□ -0.49
Nkx2-4Q9EQM3 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-4Q9EQM3 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-4Q9EQM3 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.99□□□□□ -0.49
Nkx2-4Q9EQM3 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-4Q9EQM3 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-4Q9EQM3 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Nkx2-4Q9EQM3 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.99□□□□□ -0.49
Nkx2-4Q9EQM3 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-4Q9EQM3 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-4Q9EQM3 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-4Q9EQM3 Gm23612-201ENSMUST00000103823 110 ntBASIC11.99□□□□□ -0.49
Nkx2-4Q9EQM3 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-4Q9EQM3 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx2-4Q9EQM3 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC11.99□□□□□ -0.49
Nkx2-4Q9EQM3 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC11.99□□□□□ -0.49
Nkx2-4Q9EQM3 Gm23576-201ENSMUST00000179918 110 ntBASIC11.99□□□□□ -0.49
Nkx2-4Q9EQM3 Gm26976-201ENSMUST00000182929 908 ntBASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms