Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.61□□□□□ -0.71
Lsm3P62311 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm3P62311 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.61□□□□□ -0.71
Lsm3P62311 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm3P62311 Gm10146-201ENSMUST00000072739 309 ntBASIC10.61□□□□□ -0.71
Lsm3P62311 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm3P62311 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm3P62311 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Lsm3P62311 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Lsm3P62311 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm3P62311 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Lsm3P62311 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Lsm3P62311 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm3P62311 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm3P62311 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm3P62311 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm3P62311 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Lsm3P62311 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm3P62311 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm3P62311 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.61□□□□□ -0.71
Lsm3P62311 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm3P62311 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Lsm3P62311 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm3P62311 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.6□□□□□ -0.71
Lsm3P62311 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm3P62311 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm3P62311 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm3P62311 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm3P62311 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm3P62311 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.6□□□□□ -0.71
Lsm3P62311 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm3P62311 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm3P62311 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm3P62311 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm3P62311 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm3P62311 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.6□□□□□ -0.71
Lsm3P62311 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm3P62311 Gm13616-201ENSMUST00000120600 222 ntBASIC10.6□□□□□ -0.71
Lsm3P62311 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm3P62311 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC10.6□□□□□ -0.71
Lsm3P62311 Gm8018-201ENSMUST00000173536 789 ntBASIC10.6□□□□□ -0.71
Lsm3P62311 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm3P62311 Gm4768-201ENSMUST00000206199 686 ntBASIC10.6□□□□□ -0.71
Lsm3P62311 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm3P62311 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Lsm3P62311 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC10.6□□□□□ -0.71
Lsm3P62311 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm3P62311 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm3P62311 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Lsm3P62311 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.6□□□□□ -0.71
Lsm3P62311 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm3P62311 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm3P62311 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm3P62311 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm3P62311 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
Lsm3P62311 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm3P62311 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm3P62311 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm3P62311 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm3P62311 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lsm3P62311 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.6□□□□□ -0.71
Lsm3P62311 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm3P62311 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm3P62311 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm3P62311 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.59□□□□□ -0.71
Lsm3P62311 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm3P62311 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm3P62311 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm3P62311 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm3P62311 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Lsm3P62311 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm3P62311 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Lsm3P62311 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm3P62311 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm3P62311 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm3P62311 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm3P62311 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Lsm3P62311 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC10.59□□□□□ -0.71
Lsm3P62311 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm3P62311 Gm12314-201ENSMUST00000118104 538 ntBASIC10.59□□□□□ -0.71
Lsm3P62311 Gm13492-201ENSMUST00000119772 665 ntBASIC10.59□□□□□ -0.71
Lsm3P62311 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm3P62311 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.59□□□□□ -0.71
Lsm3P62311 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC10.59□□□□□ -0.71
Lsm3P62311 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm3P62311 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm3P62311 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Lsm3P62311 Gm17931-201ENSMUST00000208132 634 ntBASIC10.59□□□□□ -0.71
Lsm3P62311 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.59□□□□□ -0.71
Lsm3P62311 Lect2-202ENSMUST00000225183 823 ntBASIC10.59□□□□□ -0.71
Lsm3P62311 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.59□□□□□ -0.71
Lsm3P62311 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm3P62311 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm3P62311 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm3P62311 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC10.59□□□□□ -0.71
Lsm3P62311 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm3P62311 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm3P62311 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lsm3P62311 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC10.59□□□□□ -0.71
Lsm3P62311 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms