Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a2P25318 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC9.77□□□□□ -0.85
Col8a2P25318 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Col8a2P25318 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Col8a2P25318 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC9.77□□□□□ -0.85
Col8a2P25318 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a2P25318 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a2P25318 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC9.76□□□□□ -0.85
Col8a2P25318 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a2P25318 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a2P25318 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a2P25318 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC9.76□□□□□ -0.85
Col8a2P25318 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a2P25318 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a2P25318 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a2P25318 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC9.76□□□□□ -0.85
Col8a2P25318 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Col8a2P25318 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a2P25318 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a2P25318 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a2P25318 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a2P25318 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a2P25318 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a2P25318 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a2P25318 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a2P25318 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC9.76□□□□□ -0.85
Col8a2P25318 Gm9550-201ENSMUST00000161130 862 ntBASIC9.76□□□□□ -0.85
Col8a2P25318 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC9.76□□□□□ -0.85
Col8a2P25318 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Col8a2P25318 Gm9540-201ENSMUST00000188230 478 ntBASIC9.76□□□□□ -0.85
Col8a2P25318 Gm5852-201ENSMUST00000194119 1021 ntBASIC9.76□□□□□ -0.85
Col8a2P25318 Gm5982-201ENSMUST00000196234 512 ntBASIC9.76□□□□□ -0.85
Col8a2P25318 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a2P25318 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a2P25318 Gm29787-201ENSMUST00000222129 849 ntBASIC9.76□□□□□ -0.85
Col8a2P25318 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a2P25318 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Col8a2P25318 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a2P25318 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a2P25318 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a2P25318 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Col8a2P25318 Gm44831-201ENSMUST00000208469 2989 ntBASIC9.76□□□□□ -0.85
Col8a2P25318 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a2P25318 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC9.76□□□□□ -0.85
Col8a2P25318 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a2P25318 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Col8a2P25318 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a2P25318 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Col8a2P25318 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a2P25318 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a2P25318 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a2P25318 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a2P25318 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Col8a2P25318 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a2P25318 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a2P25318 Rubie-203ENSMUST00000227803 2430 ntBASIC9.75□□□□□ -0.85
Col8a2P25318 Gm3836-201ENSMUST00000211377 1613 ntBASIC9.75□□□□□ -0.85
Col8a2P25318 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a2P25318 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a2P25318 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a2P25318 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a2P25318 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a2P25318 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a2P25318 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a2P25318 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a2P25318 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a2P25318 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a2P25318 Gm22920-201ENSMUST00000102175 109 ntBASIC9.75□□□□□ -0.85
Col8a2P25318 Gm14193-201ENSMUST00000105067 153 ntBASIC9.75□□□□□ -0.85
Col8a2P25318 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Col8a2P25318 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Col8a2P25318 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC9.75□□□□□ -0.85
Col8a2P25318 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Col8a2P25318 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Col8a2P25318 Gm12856-201ENSMUST00000119471 1293 ntBASIC9.75□□□□□ -0.85
Col8a2P25318 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Col8a2P25318 Gm7666-201ENSMUST00000146631 819 ntBASIC9.75□□□□□ -0.85
Col8a2P25318 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a2P25318 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC9.75□□□□□ -0.85
Col8a2P25318 Gm7467-201ENSMUST00000185173 652 ntBASIC9.75□□□□□ -0.85
Col8a2P25318 Gm43186-201ENSMUST00000198130 824 ntBASIC9.75□□□□□ -0.85
Col8a2P25318 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a2P25318 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC9.75□□□□□ -0.85
Col8a2P25318 Gm9132-201ENSMUST00000210182 832 ntBASIC9.75□□□□□ -0.85
Col8a2P25318 CT025678.1-201ENSMUST00000214795 2972 ntBASIC9.75□□□□□ -0.85
Col8a2P25318 AC125486.1-201ENSMUST00000218701 320 ntBASIC9.75□□□□□ -0.85
Col8a2P25318 AC134869.4-202ENSMUST00000224350 837 ntBASIC9.75□□□□□ -0.85
Col8a2P25318 AC135469.1-201ENSMUST00000225984 772 ntBASIC9.75□□□□□ -0.85
Col8a2P25318 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a2P25318 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a2P25318 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Col8a2P25318 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a2P25318 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a2P25318 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a2P25318 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a2P25318 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a2P25318 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a2P25318 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a2P25318 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Col8a2P25318 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms