Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Col6a6Q8C6K9 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Gm26982-201ENSMUST00000182250 1151 ntBASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Gm37638-201ENSMUST00000194337 1123 ntBASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Gm5996-201ENSMUST00000211110 718 ntBASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Gm5449-201ENSMUST00000081132 357 ntBASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Gm25998-201ENSMUST00000175397 53 ntBASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Gm6114-201ENSMUST00000182472 968 ntBASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Mir6941-201ENSMUST00000184711 59 ntBASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Gm7940-201ENSMUST00000218195 769 ntBASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Gm5641-201ENSMUST00000091130 1488 ntBASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Col6a6Q8C6K9 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Gm5421-201ENSMUST00000181698 2354 ntBASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Gm9135-201ENSMUST00000182963 990 ntBASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Gm5982-201ENSMUST00000196234 512 ntBASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.57□□□□□ -0.72
Col6a6Q8C6K9 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 346.7 ms