Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.76□□□□□ -0.69
P01852 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.76□□□□□ -0.69
P01852 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.76□□□□□ -0.69
P01852 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.76□□□□□ -0.69
P01852 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
P01852 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC10.76□□□□□ -0.69
P01852 Gm12857-201ENSMUST00000117678 592 ntBASIC10.76□□□□□ -0.69
P01852 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.76□□□□□ -0.69
P01852 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.76□□□□□ -0.69
P01852 Gm25881-201ENSMUST00000157783 103 ntBASIC10.76□□□□□ -0.69
P01852 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 Mir7070-201ENSMUST00000183657 86 ntBASIC10.76□□□□□ -0.69
P01852 Gm43068-201ENSMUST00000201095 1273 ntBASIC10.76□□□□□ -0.69
P01852 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 AC155637.1-201ENSMUST00000218560 636 ntBASIC10.76□□□□□ -0.69
P01852 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
P01852 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
P01852 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.76□□□□□ -0.69
P01852 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
P01852 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.76□□□□□ -0.69
P01852 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.76□□□□□ -0.69
P01852 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.76□□□□□ -0.69
P01852 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01852 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P01852 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
P01852 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
P01852 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P01852 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
P01852 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.75□□□□□ -0.69
P01852 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P01852 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
P01852 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.75□□□□□ -0.69
P01852 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
P01852 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
P01852 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.75□□□□□ -0.69
P01852 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
P01852 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.75□□□□□ -0.69
P01852 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
P01852 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P01852 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P01852 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
P01852 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.75□□□□□ -0.69
P01852 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
P01852 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P01852 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC10.75□□□□□ -0.69
P01852 Gm14724-201ENSMUST00000118400 537 ntBASIC10.75□□□□□ -0.69
P01852 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.75□□□□□ -0.69
P01852 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.75□□□□□ -0.69
P01852 Cd63-ps-202ENSMUST00000154992 717 ntBASIC10.75□□□□□ -0.69
P01852 Gm23085-201ENSMUST00000157849 293 ntBASIC10.75□□□□□ -0.69
P01852 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
P01852 Rn7s1-201ENSMUST00000174924 300 ntBASIC10.75□□□□□ -0.69
P01852 Rn7s2-201ENSMUST00000175032 300 ntBASIC10.75□□□□□ -0.69
P01852 Gm26461-201ENSMUST00000175064 290 ntBASIC10.75□□□□□ -0.69
P01852 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
P01852 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.75□□□□□ -0.69
P01852 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC10.75□□□□□ -0.69
P01852 Gm2965-201ENSMUST00000198365 343 ntBASIC10.75□□□□□ -0.69
P01852 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.75□□□□□ -0.69
P01852 Gm9797-202ENSMUST00000218003 294 ntBASIC10.75□□□□□ -0.69
P01852 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.75□□□□□ -0.69
P01852 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P01852 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P01852 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P01852 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
P01852 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
P01852 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
P01852 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
P01852 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
P01852 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
P01852 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P01852 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
P01852 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P01852 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P01852 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
P01852 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P01852 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P01852 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
P01852 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
P01852 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms