Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tspan6O70401 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tspan6O70401 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tspan6O70401 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tspan6O70401 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tspan6O70401 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tspan6O70401 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tspan6O70401 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tspan6O70401 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tspan6O70401 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Tspan6O70401 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tspan6O70401 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tspan6O70401 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tspan6O70401 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tspan6O70401 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.47□□□□□ -0.57
Tspan6O70401 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tspan6O70401 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.47□□□□□ -0.57
Tspan6O70401 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tspan6O70401 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tspan6O70401 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Tspan6O70401 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tspan6O70401 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tspan6O70401 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tspan6O70401 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tspan6O70401 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tspan6O70401 Gm26013-201ENSMUST00000104404 119 ntBASIC11.47□□□□□ -0.57
Tspan6O70401 Gm12419-201ENSMUST00000116649 636 ntBASIC11.47□□□□□ -0.57
Tspan6O70401 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.47□□□□□ -0.57
Tspan6O70401 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.47□□□□□ -0.57
Tspan6O70401 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tspan6O70401 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Tspan6O70401 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Tspan6O70401 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.47□□□□□ -0.57
Tspan6O70401 Gm44329-201ENSMUST00000197469 112 ntBASIC11.47□□□□□ -0.57
Tspan6O70401 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.47□□□□□ -0.57
Tspan6O70401 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tspan6O70401 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC11.47□□□□□ -0.57
Tspan6O70401 Gm8342-201ENSMUST00000209839 757 ntBASIC11.47□□□□□ -0.57
Tspan6O70401 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.47□□□□□ -0.57
Tspan6O70401 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.47□□□□□ -0.57
Tspan6O70401 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.47□□□□□ -0.57
Tspan6O70401 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tspan6O70401 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Tspan6O70401 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tspan6O70401 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Tspan6O70401 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tspan6O70401 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Tspan6O70401 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tspan6O70401 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tspan6O70401 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tspan6O70401 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tspan6O70401 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tspan6O70401 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tspan6O70401 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tspan6O70401 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tspan6O70401 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tspan6O70401 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tspan6O70401 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tspan6O70401 Gm23272-201ENSMUST00000104053 129 ntBASIC11.46□□□□□ -0.57
Tspan6O70401 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Tspan6O70401 Gm15615-201ENSMUST00000118876 198 ntBASIC11.46□□□□□ -0.57
Tspan6O70401 Gm12899-201ENSMUST00000120565 551 ntBASIC11.46□□□□□ -0.57
Tspan6O70401 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tspan6O70401 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tspan6O70401 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tspan6O70401 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tspan6O70401 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.46□□□□□ -0.57
Tspan6O70401 Gm44315-201ENSMUST00000203041 219 ntBASIC11.46□□□□□ -0.57
Tspan6O70401 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.46□□□□□ -0.57
Tspan6O70401 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC11.46□□□□□ -0.57
Tspan6O70401 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.46□□□□□ -0.57
Tspan6O70401 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tspan6O70401 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tspan6O70401 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tspan6O70401 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Tspan6O70401 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tspan6O70401 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tspan6O70401 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tspan6O70401 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tspan6O70401 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tspan6O70401 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Tspan6O70401 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tspan6O70401 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tspan6O70401 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Tspan6O70401 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tspan6O70401 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tspan6O70401 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.46□□□□□ -0.58
Tspan6O70401 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tspan6O70401 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.45□□□□□ -0.58
Tspan6O70401 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tspan6O70401 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.45□□□□□ -0.58
Tspan6O70401 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tspan6O70401 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Tspan6O70401 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tspan6O70401 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tspan6O70401 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tspan6O70401 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Tspan6O70401 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tspan6O70401 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tspan6O70401 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms