Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Herc2Q4U2R1 Serpina1b-201ENSMUST00000095450 1394 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Herc2Q4U2R1 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Herc2Q4U2R1 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Herc2Q4U2R1 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Herc2Q4U2R1 Gm44629-201ENSMUST00000206951 1840 ntBASIC6.73□□□□□ -1.33
Herc2Q4U2R1 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Herc2Q4U2R1 Gm15369-201ENSMUST00000119681 394 ntBASIC6.73□□□□□ -1.33
Herc2Q4U2R1 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Herc2Q4U2R1 Gm27953-201ENSMUST00000185171 143 ntBASIC6.73□□□□□ -1.33
Herc2Q4U2R1 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC6.73□□□□□ -1.33
Herc2Q4U2R1 Gm42859-201ENSMUST00000199572 193 ntBASIC6.73□□□□□ -1.33
Herc2Q4U2R1 8030423J24Rik-201ENSMUST00000022091 869 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Herc2Q4U2R1 AC154435.1-201ENSMUST00000223938 959 ntBASIC6.73□□□□□ -1.33
Herc2Q4U2R1 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Herc2Q4U2R1 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Myo1h-209ENSMUST00000199567 1307 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Gm43674-201ENSMUST00000196313 791 ntBASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Gm44767-201ENSMUST00000206634 469 ntTSL 5 BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Crygc-201ENSMUST00000027089 783 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Gm10176-201ENSMUST00000159707 2264 ntBASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Gm14276-201ENSMUST00000117941 720 ntBASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Gm16165-201ENSMUST00000160140 795 ntBASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Ighv5-10-201ENSMUST00000194591 252 ntBASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Olfr285-201ENSMUST00000079736 960 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Gm10530-201ENSMUST00000097514 1169 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Gm8809-201ENSMUST00000119367 743 ntBASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Gm14231-201ENSMUST00000120090 592 ntBASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Gm20495-201ENSMUST00000173902 235 ntBASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Gm9864-201ENSMUST00000090043 1656 ntBASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Cenpn-201ENSMUST00000034205 1768 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Herc2Q4U2R1 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Herc2Q4U2R1 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Herc2Q4U2R1 Gm5638-201ENSMUST00000118618 1258 ntBASIC6.71□□□□□ -1.33
Herc2Q4U2R1 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Herc2Q4U2R1 Gm16574-201ENSMUST00000159301 745 ntBASIC6.71□□□□□ -1.33
Herc2Q4U2R1 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC6.71□□□□□ -1.33
Herc2Q4U2R1 Gm42917-201ENSMUST00000200668 928 ntTSL 3 BASIC6.71□□□□□ -1.33
Herc2Q4U2R1 Gm20186-203ENSMUST00000202542 741 ntTSL 3 BASIC6.71□□□□□ -1.33
Herc2Q4U2R1 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Herc2Q4U2R1 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Herc2Q4U2R1 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Herc2Q4U2R1 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Herc2Q4U2R1 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Herc2Q4U2R1 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Herc2Q4U2R1 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Herc2Q4U2R1 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
Herc2Q4U2R1 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Herc2Q4U2R1 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC6.71□□□□□ -1.33
Herc2Q4U2R1 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Herc2Q4U2R1 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC6.71□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms