Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Cxcl12-201ENSMUST00000073043 5627 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC9.62□□□□□ -0.87
Trim63Q38HM4 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Hmgb1-201ENSMUST00000085546 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Susd2-202ENSMUST00000095541 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Pantr1-208ENSMUST00000181660 2085 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Kctd7-201ENSMUST00000040616 4291 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Stau1-202ENSMUST00000109235 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Trim63Q38HM4 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Qrich2-204ENSMUST00000208602 7260 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Epn2-204ENSMUST00000108713 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Glyctk-201ENSMUST00000036382 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Cenpl-201ENSMUST00000028035 4883 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Mthfr-202ENSMUST00000097788 2652 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Mcf2-204ENSMUST00000228150 3336 ntAPPRIS ALT2 BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Stpg2-201ENSMUST00000062306 2818 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Ppil2-201ENSMUST00000023455 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Gm26780-201ENSMUST00000180748 2495 ntTSL 5 BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Sh2d7-201ENSMUST00000060242 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Bbs7-202ENSMUST00000108155 2437 ntTSL 5 BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Numb-210ENSMUST00000154043 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Nav2-202ENSMUST00000064395 11317 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Ank2-226ENSMUST00000189368 339 ntBASIC9.61□□□□□ -0.87
Trim63Q38HM4 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Ighv8-10-201ENSMUST00000199579 358 ntBASIC9.61□□□□□ -0.87
Trim63Q38HM4 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Gpm6b-204ENSMUST00000112226 3174 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Grpr-201ENSMUST00000033730 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Gm43915-201ENSMUST00000203013 5037 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Adamts13-202ENSMUST00000102891 4506 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Gm28138-201ENSMUST00000186250 2167 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Gm29270-201ENSMUST00000188071 2167 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Gm29392-201ENSMUST00000189429 2167 ntTSL 5 BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Gm29252-201ENSMUST00000189869 2167 ntTSL 5 BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Gm29305-201ENSMUST00000191054 2167 ntTSL 5 BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Olfr731-204ENSMUST00000214388 5438 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Gm42826-201ENSMUST00000197548 2639 ntBASIC9.61□□□□□ -0.87
Trim63Q38HM4 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Zfp532-201ENSMUST00000049016 5503 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Extl1-201ENSMUST00000030643 4126 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
Trim63Q38HM4 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Klhl22-202ENSMUST00000120488 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Trim63Q38HM4 Btrc-206ENSMUST00000224102 3037 ntBASIC9.61□□□□□ -0.87
Trim63Q38HM4 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Nlrp12-201ENSMUST00000108653 6928 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Cdk12-201ENSMUST00000003203 4837 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Olfr914-202ENSMUST00000217057 4948 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Eif4e1b-206ENSMUST00000132728 1897 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Pde11a-201ENSMUST00000099992 4189 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Bcat1-203ENSMUST00000111742 2556 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Trip12-207ENSMUST00000186648 6442 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Gm15393-201ENSMUST00000120499 219 ntBASIC9.6□□□□□ -0.87
Trim63Q38HM4 Gm11400-201ENSMUST00000120853 1214 ntBASIC9.6□□□□□ -0.87
Trim63Q38HM4 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC9.6□□□□□ -0.87
Trim63Q38HM4 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Trim63Q38HM4 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Trim63Q38HM4 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms