Protein–RNA interactions for Protein: P80206

Otx2, Homeobox protein OTX2, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otx2P80206 Gm5542-201ENSMUST00000195485 1089 ntBASIC10.88□□□□□ -0.67
Otx2P80206 Gm37793-201ENSMUST00000195548 695 ntBASIC10.88□□□□□ -0.67
Otx2P80206 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Otx2P80206 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.88□□□□□ -0.67
Otx2P80206 Gm44124-201ENSMUST00000204159 472 ntBASIC10.88□□□□□ -0.67
Otx2P80206 CT485606.1-201ENSMUST00000213187 878 ntBASIC10.88□□□□□ -0.67
Otx2P80206 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC10.88□□□□□ -0.67
Otx2P80206 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.88□□□□□ -0.67
Otx2P80206 Gm7940-201ENSMUST00000218195 769 ntBASIC10.88□□□□□ -0.67
Otx2P80206 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Otx2P80206 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.88□□□□□ -0.67
Otx2P80206 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC10.88□□□□□ -0.67
Otx2P80206 AC154257.1-202ENSMUST00000224729 843 ntBASIC10.88□□□□□ -0.67
Otx2P80206 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Otx2P80206 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Otx2P80206 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Otx2P80206 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Otx2P80206 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Otx2P80206 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Otx2P80206 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Otx2P80206 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Otx2P80206 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Otx2P80206 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Otx2P80206 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Otx2P80206 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Otx2P80206 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Otx2P80206 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Otx2P80206 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Otx2P80206 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Otx2P80206 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Otx2P80206 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Otx2P80206 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Otx2P80206 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Otx2P80206 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Otx2P80206 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Otx2P80206 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Otx2P80206 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC10.87□□□□□ -0.67
Otx2P80206 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Gm12516-201ENSMUST00000120819 385 ntBASIC10.87□□□□□ -0.67
Otx2P80206 Gm7150-201ENSMUST00000122032 981 ntBASIC10.87□□□□□ -0.67
Otx2P80206 Gm13182-201ENSMUST00000122241 312 ntBASIC10.87□□□□□ -0.67
Otx2P80206 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Gm26047-201ENSMUST00000157308 113 ntBASIC10.87□□□□□ -0.67
Otx2P80206 Gm24844-201ENSMUST00000158679 127 ntBASIC10.87□□□□□ -0.67
Otx2P80206 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.87□□□□□ -0.67
Otx2P80206 Gm26047-202ENSMUST00000198840 115 ntBASIC10.87□□□□□ -0.67
Otx2P80206 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Gm6108-201ENSMUST00000208365 367 ntBASIC10.87□□□□□ -0.67
Otx2P80206 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC10.87□□□□□ -0.67
Otx2P80206 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.87□□□□□ -0.67
Otx2P80206 Gm9661-201ENSMUST00000221611 1122 ntBASIC10.87□□□□□ -0.67
Otx2P80206 AC132901.1-201ENSMUST00000224345 508 ntBASIC10.87□□□□□ -0.67
Otx2P80206 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.87□□□□□ -0.67
Otx2P80206 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.87□□□□□ -0.67
Otx2P80206 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.87□□□□□ -0.67
Otx2P80206 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.87□□□□□ -0.67
Otx2P80206 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 CT009489.1-201ENSMUST00000227740 1893 ntBASIC10.87□□□□□ -0.67
Otx2P80206 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Otx2P80206 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Otx2P80206 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.87□□□□□ -0.67
Otx2P80206 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC10.87□□□□□ -0.67
Otx2P80206 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Otx2P80206 Gm20633-201ENSMUST00000176742 2831 ntBASIC10.86□□□□□ -0.67
Otx2P80206 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Otx2P80206 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Otx2P80206 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Otx2P80206 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms