Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sssca1P56873 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sssca1P56873 Gm37969-201ENSMUST00000195777 3409 ntBASIC9.48□□□□□ -0.89
Sssca1P56873 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC9.48□□□□□ -0.89
Sssca1P56873 Gm37931-201ENSMUST00000194686 2866 ntBASIC9.48□□□□□ -0.89
Sssca1P56873 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sssca1P56873 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sssca1P56873 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Sssca1P56873 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Sssca1P56873 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sssca1P56873 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC9.48□□□□□ -0.89
Sssca1P56873 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sssca1P56873 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sssca1P56873 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sssca1P56873 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sssca1P56873 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Sssca1P56873 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Sssca1P56873 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Sssca1P56873 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Sssca1P56873 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Sssca1P56873 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Sssca1P56873 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Gm5859-201ENSMUST00000165401 2324 ntBASIC9.47□□□□□ -0.89
Sssca1P56873 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC9.47□□□□□ -0.89
Sssca1P56873 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC9.47□□□□□ -0.89
Sssca1P56873 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Sssca1P56873 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Gm5419-201ENSMUST00000119301 527 ntBASIC9.47□□□□□ -0.89
Sssca1P56873 Gm11658-201ENSMUST00000120913 1008 ntBASIC9.47□□□□□ -0.89
Sssca1P56873 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC9.47□□□□□ -0.89
Sssca1P56873 Gm8835-201ENSMUST00000173096 1169 ntBASIC9.47□□□□□ -0.89
Sssca1P56873 Gm2467-201ENSMUST00000182266 1010 ntBASIC9.47□□□□□ -0.89
Sssca1P56873 Gm6981-201ENSMUST00000182467 1008 ntBASIC9.47□□□□□ -0.89
Sssca1P56873 Gm27731-201ENSMUST00000185192 107 ntBASIC9.47□□□□□ -0.89
Sssca1P56873 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC9.47□□□□□ -0.89
Sssca1P56873 Gm19963-201ENSMUST00000208413 1255 ntBASIC9.47□□□□□ -0.89
Sssca1P56873 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC9.47□□□□□ -0.89
Sssca1P56873 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC9.47□□□□□ -0.89
Sssca1P56873 CU024892.2-201ENSMUST00000224608 832 ntBASIC9.47□□□□□ -0.89
Sssca1P56873 AC154462.2-201ENSMUST00000227519 370 ntBASIC9.47□□□□□ -0.89
Sssca1P56873 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Sssca1P56873 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Sssca1P56873 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC9.47□□□□□ -0.89
Sssca1P56873 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
Sssca1P56873 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Sssca1P56873 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Sssca1P56873 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Sssca1P56873 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Sssca1P56873 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Sssca1P56873 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Sssca1P56873 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Sssca1P56873 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Sssca1P56873 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Sssca1P56873 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Sssca1P56873 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Sssca1P56873 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Sssca1P56873 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Sssca1P56873 Gm21136-201ENSMUST00000186812 2575 ntBASIC9.46□□□□□ -0.89
Sssca1P56873 Gm6605-201ENSMUST00000031488 2574 ntBASIC9.46□□□□□ -0.89
Sssca1P56873 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC9.46□□□□□ -0.89
Sssca1P56873 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Sssca1P56873 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Sssca1P56873 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
Sssca1P56873 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
Sssca1P56873 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms