Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Raet1aO08602 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Raet1aO08602 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Raet1aO08602 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Raet1aO08602 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.43□□□□□ -0.74
Raet1aO08602 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Raet1aO08602 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Raet1aO08602 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Raet1aO08602 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Raet1aO08602 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Raet1aO08602 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Raet1aO08602 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Raet1aO08602 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Raet1aO08602 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.43□□□□□ -0.74
Raet1aO08602 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.43□□□□□ -0.74
Raet1aO08602 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Raet1aO08602 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Raet1aO08602 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Raet1aO08602 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.43□□□□□ -0.74
Raet1aO08602 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Raet1aO08602 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC10.43□□□□□ -0.74
Raet1aO08602 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Raet1aO08602 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.43□□□□□ -0.74
Raet1aO08602 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Raet1aO08602 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Raet1aO08602 Gm8343-201ENSMUST00000182705 994 ntBASIC10.43□□□□□ -0.74
Raet1aO08602 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Raet1aO08602 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Raet1aO08602 Gm43184-201ENSMUST00000197247 542 ntBASIC10.43□□□□□ -0.74
Raet1aO08602 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC10.43□□□□□ -0.74
Raet1aO08602 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.43□□□□□ -0.74
Raet1aO08602 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC10.43□□□□□ -0.74
Raet1aO08602 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10.43□□□□□ -0.74
Raet1aO08602 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC10.43□□□□□ -0.74
Raet1aO08602 Gm9797-202ENSMUST00000218003 294 ntBASIC10.43□□□□□ -0.74
Raet1aO08602 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.43□□□□□ -0.74
Raet1aO08602 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.43□□□□□ -0.74
Raet1aO08602 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Raet1aO08602 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Raet1aO08602 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Raet1aO08602 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Raet1aO08602 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.43□□□□□ -0.74
Raet1aO08602 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Raet1aO08602 Rgr-203ENSMUST00000225070 4704 ntBASIC10.43□□□□□ -0.74
Raet1aO08602 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Raet1aO08602 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Raet1aO08602 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Raet1aO08602 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Raet1aO08602 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Raet1aO08602 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Raet1aO08602 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Raet1aO08602 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Raet1aO08602 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.43□□□□□ -0.74
Raet1aO08602 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Raet1aO08602 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Raet1aO08602 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Raet1aO08602 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Raet1aO08602 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Raet1aO08602 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Raet1aO08602 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Raet1aO08602 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Raet1aO08602 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Raet1aO08602 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Raet1aO08602 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Raet1aO08602 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Raet1aO08602 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Raet1aO08602 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Raet1aO08602 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Raet1aO08602 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Raet1aO08602 Gm11509-201ENSMUST00000117358 325 ntBASIC10.42□□□□□ -0.74
Raet1aO08602 Gm12749-201ENSMUST00000122138 1159 ntBASIC10.42□□□□□ -0.74
Raet1aO08602 Gm24749-201ENSMUST00000157838 343 ntBASIC10.42□□□□□ -0.74
Raet1aO08602 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Raet1aO08602 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Raet1aO08602 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC10.42□□□□□ -0.74
Raet1aO08602 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Raet1aO08602 Gm4819-201ENSMUST00000182170 1009 ntBASIC10.42□□□□□ -0.74
Raet1aO08602 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.42□□□□□ -0.74
Raet1aO08602 Gm37666-201ENSMUST00000194110 866 ntBASIC10.42□□□□□ -0.74
Raet1aO08602 Gm38314-201ENSMUST00000195709 625 ntBASIC10.42□□□□□ -0.74
Raet1aO08602 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
Raet1aO08602 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.42□□□□□ -0.74
Raet1aO08602 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.42□□□□□ -0.74
Raet1aO08602 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Raet1aO08602 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Raet1aO08602 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Raet1aO08602 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Raet1aO08602 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Raet1aO08602 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Raet1aO08602 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Raet1aO08602 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Raet1aO08602 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Raet1aO08602 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Raet1aO08602 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Raet1aO08602 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.42□□□□□ -0.74
Raet1aO08602 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Raet1aO08602 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Raet1aO08602 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.42□□□□□ -0.74
Raet1aO08602 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Raet1aO08602 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms