Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Ssr1Q9CY50 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssr1Q9CY50 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssr1Q9CY50 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.85□□□□□ -0.35
Ssr1Q9CY50 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssr1Q9CY50 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Ssr1Q9CY50 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssr1Q9CY50 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssr1Q9CY50 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ssr1Q9CY50 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.85□□□□□ -0.35
Ssr1Q9CY50 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.85□□□□□ -0.35
Ssr1Q9CY50 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ssr1Q9CY50 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssr1Q9CY50 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssr1Q9CY50 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Ssr1Q9CY50 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ssr1Q9CY50 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Tmem56-207ENSMUST00000155309 2230 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.84□□□□□ -0.35
Ssr1Q9CY50 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.84□□□□□ -0.35
Ssr1Q9CY50 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Gm27572-201ENSMUST00000183702 255 ntBASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Gm38158-201ENSMUST00000194617 339 ntBASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Gm35960-201ENSMUST00000202712 767 ntBASIC12.84□□□□□ -0.35
Ssr1Q9CY50 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Gm9823-201ENSMUST00000051212 327 ntBASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ssr1Q9CY50 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Ssr1Q9CY50 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ssr1Q9CY50 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ssr1Q9CY50 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Ssr1Q9CY50 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ssr1Q9CY50 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssr1Q9CY50 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssr1Q9CY50 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssr1Q9CY50 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssr1Q9CY50 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ssr1Q9CY50 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssr1Q9CY50 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssr1Q9CY50 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.83□□□□□ -0.36
Ssr1Q9CY50 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Ssr1Q9CY50 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ssr1Q9CY50 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssr1Q9CY50 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ssr1Q9CY50 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.83□□□□□ -0.36
Ssr1Q9CY50 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.83□□□□□ -0.36
Ssr1Q9CY50 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ssr1Q9CY50 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.83□□□□□ -0.36
Ssr1Q9CY50 Gm37489-201ENSMUST00000191883 159 ntBASIC12.83□□□□□ -0.36
Ssr1Q9CY50 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssr1Q9CY50 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ssr1Q9CY50 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.83□□□□□ -0.36
Ssr1Q9CY50 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.83□□□□□ -0.36
Ssr1Q9CY50 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ssr1Q9CY50 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssr1Q9CY50 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ssr1Q9CY50 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ssr1Q9CY50 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssr1Q9CY50 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ssr1Q9CY50 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ssr1Q9CY50 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssr1Q9CY50 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ssr1Q9CY50 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ssr1Q9CY50 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 151 ms