Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Usp6nlQ80XC3 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.02□□□□□ -0.32
Usp6nlQ80XC3 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Usp6nlQ80XC3 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.02□□□□□ -0.32
Usp6nlQ80XC3 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Usp6nlQ80XC3 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Usp6nlQ80XC3 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Usp6nlQ80XC3 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.02□□□□□ -0.32
Usp6nlQ80XC3 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Usp6nlQ80XC3 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Usp6nlQ80XC3 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC13.02□□□□□ -0.32
Usp6nlQ80XC3 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Usp6nlQ80XC3 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.02□□□□□ -0.32
Usp6nlQ80XC3 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Usp6nlQ80XC3 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Usp6nlQ80XC3 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Usp6nlQ80XC3 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp6nlQ80XC3 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.02□□□□□ -0.33
Usp6nlQ80XC3 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Usp6nlQ80XC3 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp6nlQ80XC3 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp6nlQ80XC3 Gm17798-201ENSMUST00000182282 1035 ntBASIC13.02□□□□□ -0.33
Usp6nlQ80XC3 Mir6407-201ENSMUST00000184510 101 ntBASIC13.02□□□□□ -0.33
Usp6nlQ80XC3 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Usp6nlQ80XC3 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC13.02□□□□□ -0.33
Usp6nlQ80XC3 Gm9139-201ENSMUST00000218817 700 ntBASIC13.02□□□□□ -0.33
Usp6nlQ80XC3 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC13.02□□□□□ -0.33
Usp6nlQ80XC3 CT009536.2-201ENSMUST00000225370 665 ntBASIC13.02□□□□□ -0.33
Usp6nlQ80XC3 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Usp6nlQ80XC3 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Usp6nlQ80XC3 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp6nlQ80XC3 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Usp6nlQ80XC3 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.02□□□□□ -0.33
Usp6nlQ80XC3 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp6nlQ80XC3 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Usp6nlQ80XC3 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Usp6nlQ80XC3 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Usp6nlQ80XC3 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Gm14219-201ENSMUST00000120414 288 ntBASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Gm22877-201ENSMUST00000175451 105 ntBASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 AC118639.2-201ENSMUST00000226289 223 ntBASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Gm6655-201ENSMUST00000201932 1309 ntBASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Gm45199-201ENSMUST00000207640 1507 ntBASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Usp6nlQ80XC3 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp6nlQ80XC3 Paupar-201ENSMUST00000194826 3482 ntBASIC13□□□□□ -0.33
Usp6nlQ80XC3 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp6nlQ80XC3 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp6nlQ80XC3 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13□□□□□ -0.33
Usp6nlQ80XC3 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13□□□□□ -0.33
Usp6nlQ80XC3 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp6nlQ80XC3 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp6nlQ80XC3 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Usp6nlQ80XC3 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp6nlQ80XC3 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13□□□□□ -0.33
Usp6nlQ80XC3 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC13□□□□□ -0.33
Usp6nlQ80XC3 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Usp6nlQ80XC3 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Usp6nlQ80XC3 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC13□□□□□ -0.33
Usp6nlQ80XC3 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC13□□□□□ -0.33
Usp6nlQ80XC3 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC13□□□□□ -0.33
Usp6nlQ80XC3 Gm9116-201ENSMUST00000192400 1018 ntBASIC13□□□□□ -0.33
Usp6nlQ80XC3 Gm5982-201ENSMUST00000196234 512 ntBASIC13□□□□□ -0.33
Usp6nlQ80XC3 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC13□□□□□ -0.33
Usp6nlQ80XC3 CT009546.1-201ENSMUST00000222573 1120 ntBASIC13□□□□□ -0.33
Usp6nlQ80XC3 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms