Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk2P38575 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Upk2P38575 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk2P38575 Paupar-201ENSMUST00000194826 3482 ntBASIC10.32□□□□□ -0.76
Upk2P38575 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Upk2P38575 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.32□□□□□ -0.76
Upk2P38575 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk2P38575 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.32□□□□□ -0.76
Upk2P38575 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk2P38575 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk2P38575 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.32□□□□□ -0.76
Upk2P38575 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk2P38575 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk2P38575 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.32□□□□□ -0.76
Upk2P38575 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk2P38575 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk2P38575 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk2P38575 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk2P38575 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk2P38575 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk2P38575 Rgr-203ENSMUST00000225070 4704 ntBASIC10.31□□□□□ -0.76
Upk2P38575 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk2P38575 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk2P38575 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Upk2P38575 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Upk2P38575 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk2P38575 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Upk2P38575 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk2P38575 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Upk2P38575 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk2P38575 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC10.31□□□□□ -0.76
Upk2P38575 Gm12749-201ENSMUST00000122138 1159 ntBASIC10.31□□□□□ -0.76
Upk2P38575 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk2P38575 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.31□□□□□ -0.76
Upk2P38575 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Upk2P38575 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Upk2P38575 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Upk2P38575 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC10.31□□□□□ -0.76
Upk2P38575 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.31□□□□□ -0.76
Upk2P38575 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.31□□□□□ -0.76
Upk2P38575 Gm18065-201ENSMUST00000221395 526 ntBASIC10.31□□□□□ -0.76
Upk2P38575 Gm8420-201ENSMUST00000097103 598 ntBASIC10.31□□□□□ -0.76
Upk2P38575 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Upk2P38575 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk2P38575 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk2P38575 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.31□□□□□ -0.76
Upk2P38575 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk2P38575 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk2P38575 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk2P38575 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.31□□□□□ -0.76
Upk2P38575 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk2P38575 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk2P38575 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.31□□□□□ -0.76
Upk2P38575 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Upk2P38575 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Upk2P38575 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Upk2P38575 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Upk2P38575 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Upk2P38575 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Upk2P38575 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Upk2P38575 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Upk2P38575 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Upk2P38575 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Upk2P38575 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Upk2P38575 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
Upk2P38575 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Upk2P38575 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.3□□□□□ -0.76
Upk2P38575 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Upk2P38575 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Upk2P38575 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.3□□□□□ -0.76
Upk2P38575 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Upk2P38575 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.3□□□□□ -0.76
Upk2P38575 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Upk2P38575 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Upk2P38575 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC10.3□□□□□ -0.76
Upk2P38575 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.3□□□□□ -0.76
Upk2P38575 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Upk2P38575 Gm15711-201ENSMUST00000118889 535 ntBASIC10.3□□□□□ -0.76
Upk2P38575 Gm12380-201ENSMUST00000119012 544 ntBASIC10.3□□□□□ -0.76
Upk2P38575 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.3□□□□□ -0.76
Upk2P38575 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Upk2P38575 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC10.3□□□□□ -0.76
Upk2P38575 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.3□□□□□ -0.76
Upk2P38575 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Upk2P38575 Gm4819-201ENSMUST00000182170 1009 ntBASIC10.3□□□□□ -0.76
Upk2P38575 Mir8093-201ENSMUST00000185043 137 ntBASIC10.3□□□□□ -0.76
Upk2P38575 Gm3332-201ENSMUST00000189337 928 ntBASIC10.3□□□□□ -0.76
Upk2P38575 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.3□□□□□ -0.76
Upk2P38575 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Upk2P38575 Gm7003-201ENSMUST00000195089 312 ntBASIC10.3□□□□□ -0.76
Upk2P38575 Gm5982-201ENSMUST00000196234 512 ntBASIC10.3□□□□□ -0.76
Upk2P38575 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.3□□□□□ -0.76
Upk2P38575 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Upk2P38575 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Upk2P38575 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC10.3□□□□□ -0.76
Upk2P38575 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.3□□□□□ -0.76
Upk2P38575 AC154171.1-201ENSMUST00000224610 643 ntBASIC10.3□□□□□ -0.76
Upk2P38575 Gm807-202ENSMUST00000224929 408 ntBASIC10.3□□□□□ -0.76
Upk2P38575 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Upk2P38575 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms