Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.31□□□□□ -0.6
Hcn1O88704 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hcn1O88704 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hcn1O88704 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hcn1O88704 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hcn1O88704 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hcn1O88704 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.31□□□□□ -0.6
Hcn1O88704 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hcn1O88704 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hcn1O88704 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.31□□□□□ -0.6
Hcn1O88704 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.31□□□□□ -0.6
Hcn1O88704 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hcn1O88704 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hcn1O88704 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.31□□□□□ -0.6
Hcn1O88704 Gm9230-201ENSMUST00000188228 532 ntBASIC11.31□□□□□ -0.6
Hcn1O88704 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hcn1O88704 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.31□□□□□ -0.6
Hcn1O88704 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.31□□□□□ -0.6
Hcn1O88704 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.31□□□□□ -0.6
Hcn1O88704 Gm45224-201ENSMUST00000208203 414 ntBASIC11.31□□□□□ -0.6
Hcn1O88704 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.31□□□□□ -0.6
Hcn1O88704 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hcn1O88704 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hcn1O88704 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Hcn1O88704 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Hcn1O88704 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.31□□□□□ -0.6
Hcn1O88704 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hcn1O88704 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hcn1O88704 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hcn1O88704 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hcn1O88704 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hcn1O88704 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.31□□□□□ -0.6
Hcn1O88704 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.31□□□□□ -0.6
Hcn1O88704 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hcn1O88704 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hcn1O88704 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.31□□□□□ -0.6
Hcn1O88704 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hcn1O88704 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Hcn1O88704 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Hcn1O88704 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.3□□□□□ -0.6
Hcn1O88704 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 Gm13296-201ENSMUST00000117854 997 ntBASIC11.3□□□□□ -0.6
Hcn1O88704 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.3□□□□□ -0.6
Hcn1O88704 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.3□□□□□ -0.6
Hcn1O88704 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.3□□□□□ -0.6
Hcn1O88704 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.3□□□□□ -0.6
Hcn1O88704 Gm32999-201ENSMUST00000192693 562 ntBASIC11.3□□□□□ -0.6
Hcn1O88704 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.3□□□□□ -0.6
Hcn1O88704 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.3□□□□□ -0.6
Hcn1O88704 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.3□□□□□ -0.6
Hcn1O88704 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.3□□□□□ -0.6
Hcn1O88704 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.3□□□□□ -0.6
Hcn1O88704 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 Mir433-201ENSMUST00000093564 124 ntBASIC11.3□□□□□ -0.6
Hcn1O88704 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.3□□□□□ -0.6
Hcn1O88704 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.3□□□□□ -0.6
Hcn1O88704 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hcn1O88704 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.29□□□□□ -0.6
Hcn1O88704 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcn1O88704 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcn1O88704 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcn1O88704 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Hcn1O88704 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcn1O88704 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcn1O88704 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcn1O88704 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Hcn1O88704 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.29□□□□□ -0.6
Hcn1O88704 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms